Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AC007336.1-201ENST00000576365 3828 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 MIR4648-201ENST00000580107 72 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 DISC2.1-201ENST00000612827 205 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AC121333.1-201ENST00000567488 2709 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC002543.1-201ENST00000299783 1954 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.402-201ENST00000383972 102 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 RNU6-1032P-201ENST00000384100 107 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 RNU6-692P-201ENST00000384496 107 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 MTCO1P21-201ENST00000416634 589 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 SRIP2-201ENST00000428470 166 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 ERLEC1P1-201ENST00000433806 578 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 MTND1P34-201ENST00000438556 671 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 RPL39P29-201ENST00000447779 157 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 RNU7-138P-201ENST00000459479 64 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 RPS29P21-201ENST00000496272 170 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 MIR5692C1-201ENST00000585309 91 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 BNIP3P16-201ENST00000589779 534 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 BNIP3P25-201ENST00000596023 559 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 VN1R107P-201ENST00000601784 209 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC004492.1-201ENST00000607036 742 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AL121757.2-201ENST00000611223 313 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 AC007792.1-201ENST00000623023 402 ntBASIC2.29□□□□□ -2.04
SNX25Q9H3E2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX25Q9H3E2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.9-201ENST00000362354 101 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.256-201ENST00000364594 104 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.450-201ENST00000384198 113 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 SNORD73A-201ENST00000386062 65 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 ARL5AP1-201ENST00000418991 388 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AL161788.1-201ENST00000441805 169 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 RPL30P1-201ENST00000488676 339 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 RNU1-41P-201ENST00000516161 162 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 RNU1-48P-201ENST00000516400 162 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AP005902.1-201ENST00000521358 186 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AP005597.4-201ENST00000526762 229 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC109635.3-201ENST00000529536 185 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC093249.1-201ENST00000567049 203 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC009127.3-201ENST00000570531 403 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC107304.1-201ENST00000604229 296 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC104458.1-201ENST00000608243 463 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC090517.2-201ENST00000614966 680 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 U4.5-201ENST00000617137 123 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC024614.3-201ENST00000637860 256 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 AC241585.2-209ENST00000638217 143 ntBASIC2.28□□□□□ -2.04
SNX25Q9H3E2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SNX25Q9H3E2 RNU6-655P-201ENST00000362858 107 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 SNORA67.3-201ENST00000384366 140 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 RNU6-1222P-201ENST00000384615 107 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 CBX3P9-201ENST00000402326 552 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AL353752.1-201ENST00000454946 260 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 CKS1BP2-201ENST00000497342 240 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.27□□□□□ -2.05
SNX25Q9H3E2 MTND1P35-201ENST00000526739 508 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC068790.6-201ENST00000602558 258 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC009314.1-201ENST00000603871 304 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 RMST_3.1-201ENST00000611651 109 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
SNX25Q9H3E2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNX25Q9H3E2 U3.13-201ENST00000364804 214 ntBASIC2.26□□□□□ -2.05
SNX25Q9H3E2 SNORD32A-201ENST00000364805 84 ntBASIC2.26□□□□□ -2.05
SNX25Q9H3E2 MIR548F1-201ENST00000408667 84 ntBASIC2.26□□□□□ -2.05
SNX25Q9H3E2 Y_RNA.615-201ENST00000410769 117 ntBASIC2.26□□□□□ -2.05
SNX25Q9H3E2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.26□□□□□ -2.05
SNX25Q9H3E2 USP9YP18-201ENST00000425912 695 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 309.6 ms