Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS11Q9H270 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
VPS11Q9H270 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS11Q9H270 BX322639.1-202ENST00000423987 2213 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS11Q9H270 RPL9P7-201ENST00000330965 580 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 Y_RNA.240-201ENST00000364469 95 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RNA5SP479-201ENST00000364858 117 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RNU6-290P-201ENST00000365212 101 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 Y_RNA.358-201ENST00000365491 99 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS11Q9H270 RNY3P4-201ENST00000384428 101 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 AC093578.1-201ENST00000415219 368 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS11Q9H270 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS11Q9H270 AL513043.1-201ENST00000439124 535 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 NDUFB4P10-201ENST00000452541 359 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RPL9P9-202ENST00000466501 579 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 COX6CP14-201ENST00000469580 174 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RN7SL594P-201ENST00000470590 287 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 AC022493.1-201ENST00000492984 337 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 HMGN1P11-201ENST00000508668 303 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 Y_RNA.662-201ENST00000516028 97 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 SNORA31.18-201ENST00000517043 134 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 MIR2116-201ENST00000517221 80 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS11Q9H270 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS11Q9H270 AC023824.2-201ENST00000566185 400 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 RNU1-30P-201ENST00000606575 163 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 AC009318.2-201ENST00000610917 651 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 AC243829.7-201ENST00000633081 225 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
VPS11Q9H270 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS11Q9H270 AL079305.1-201ENST00000623159 3008 ntBASIC3.55□□□□□ -1.84
VPS11Q9H270 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS11Q9H270 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS11Q9H270 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS11Q9H270 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS11Q9H270 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS11Q9H270 Y_RNA.44-201ENST00000362676 108 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 SNORA73.2-201ENST00000364946 201 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 MIR521-1-201ENST00000384902 87 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RNU6-918P-201ENST00000391219 106 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 SNORA40C-201ENST00000391285 128 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS11Q9H270 RNU6-1135P-201ENST00000411083 103 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS11Q9H270 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS11Q9H270 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS11Q9H270 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RPL21P13-201ENST00000488305 481 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RPS27AP10-201ENST00000496103 208 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS11Q9H270 AC074133.1-201ENST00000515696 183 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RNU6-479P-201ENST00000516348 105 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 SNORA70.19-201ENST00000516717 90 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 SNORA31.19-201ENST00000517079 126 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
VPS11Q9H270 MRPS18CP4-201ENST00000535821 231 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 AC009314.1-201ENST00000603871 304 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 RMST_4.1-201ENST00000616886 107 ntBASIC3.54□□□□□ -1.84
VPS11Q9H270 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VPS11Q9H270 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS11Q9H270 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS11Q9H270 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS11Q9H270 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS11Q9H270 MIR412-201ENST00000362142 91 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 U3.6-201ENST00000363622 211 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 Y_RNA.292-201ENST00000364904 97 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 SNORA22C-201ENST00000384614 134 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 MIR190B-201ENST00000401119 79 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 MIR1193-201ENST00000408109 78 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS11Q9H270 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS11Q9H270 RNU6-1037P-201ENST00000459571 107 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 RPS29P20-201ENST00000489592 171 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS11Q9H270 RN7SKP21-201ENST00000516503 220 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 RNU6-1012P-201ENST00000516606 109 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 RNU6-572P-201ENST00000516724 80 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 AC109479.2-201ENST00000517842 174 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS11Q9H270 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS11Q9H270 HMGN2P15-201ENST00000585707 270 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 AC240442.1-201ENST00000616055 283 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS11Q9H270 RNA5SP196-201ENST00000625967 102 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 U6.99-201ENST00000637524 83 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS11Q9H270 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS11Q9H270 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
VPS11Q9H270 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS11Q9H270 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms