Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC018865.2-201ENST00000423631 129 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 RPS15AP5-201ENST00000436276 388 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.88□□□□□ -1.95
CDT1Q9H211 RN7SL283P-201ENST00000489055 303 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC026801.1-201ENST00000497178 464 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC096745.1-201ENST00000509945 370 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 RNA5SP380-201ENST00000517190 98 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC006199.1-201ENST00000548728 219 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC100830.2-201ENST00000581636 240 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDT1Q9H211 AC011494.1-201ENST00000596454 237 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.88□□□□□ -1.95
CDT1Q9H211 AL161423.1-201ENST00000613700 262 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 AC007485.1-201ENST00000616755 206 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.88□□□□□ -1.95
CDT1Q9H211 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDT1Q9H211 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDT1Q9H211 AC108206.1-201ENST00000570186 4159 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 MTND5P27-201ENST00000428871 1720 ntBASIC2.88□□□□□ -1.95
CDT1Q9H211 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDT1Q9H211 CDC27P3-201ENST00000635418 1910 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 MTND5P10-201ENST00000603719 1809 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 SNORD62.1-201ENST00000362541 86 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 SNORA51.4-201ENST00000364993 124 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 RNU6-26P-201ENST00000383985 107 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 RNU6-214P-201ENST00000384130 107 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 RNU2-49P-201ENST00000410666 184 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC243428.1-201ENST00000421099 264 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.87□□□□□ -1.95
CDT1Q9H211 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.87□□□□□ -1.95
CDT1Q9H211 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AL031274.1-201ENST00000450334 232 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AC096725.1-201ENST00000514266 313 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 RNA5SP282-201ENST00000516355 108 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC010653.1-201ENST00000571108 881 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AC013412.1-201ENST00000610687 192 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.87□□□□□ -1.95
CDT1Q9H211 AC004852.3-201ENST00000614131 326 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 MIR3199-2-201ENST00000636243 86 ntBASIC2.87□□□□□ -1.95
CDT1Q9H211 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDT1Q9H211 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CDT1Q9H211 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
CDT1Q9H211 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
CDT1Q9H211 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 RNU6-1280P-201ENST00000365211 107 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 RNU1-100P-201ENST00000365255 165 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 SNORD21-201ENST00000383953 95 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 RNU6-1040P-201ENST00000383974 107 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AL365496.1-201ENST00000426885 215 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.86□□□□□ -1.95
CDT1Q9H211 RPS3P1-201ENST00000456781 192 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 SNORD5.1-201ENST00000458800 75 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 AC103975.1-201ENST00000482506 483 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AC021146.2-201ENST00000504736 556 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.86□□□□□ -1.95
CDT1Q9H211 AC116655.1-201ENST00000508324 901 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 AC113155.1-201ENST00000511141 769 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 SCARNA16.2-201ENST00000516520 172 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 RNU6-699P-201ENST00000517081 110 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
CDT1Q9H211 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 SCARNA4-202ENST00000625402 129 ntBASIC2.86□□□□□ -1.95
CDT1Q9H211 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDT1Q9H211 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDT1Q9H211 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDT1Q9H211 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 MIR449A-201ENST00000362113 91 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNA5SP432-201ENST00000362480 116 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 Y_RNA.48-201ENST00000362710 103 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNU6-78P-201ENST00000362897 107 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNU6-942P-201ENST00000363002 107 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNU5E-7P-201ENST00000365290 117 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNU6-827P-201ENST00000365553 106 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RNU6-574P-201ENST00000384265 107 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.85□□□□□ -1.95
CDT1Q9H211 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.85□□□□□ -1.95
CDT1Q9H211 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.85□□□□□ -1.95
CDT1Q9H211 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.85□□□□□ -1.95
CDT1Q9H211 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.85□□□□□ -1.95
CDT1Q9H211 SNORA43.2-201ENST00000516652 128 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 Y_RNA.708-201ENST00000516950 96 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 RN7SKP295-201ENST00000517264 153 ntBASIC2.85□□□□□ -1.95
CDT1Q9H211 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.85□□□□□ -1.95
CDT1Q9H211 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms