Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AL512286.1-201ENST00000439244 400 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.08□□□□□ -2.24
ALX4Q9H161 KATNBL1P3-201ENST00000443475 909 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.08□□□□□ -2.24
ALX4Q9H161 AC005908.1-201ENST00000468701 347 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AC010409.1-201ENST00000487382 476 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AC025465.3-201ENST00000510570 311 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 RNU6-685P-201ENST00000517088 95 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 RNA5SP490-201ENST00000517141 136 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.08□□□□□ -2.24
ALX4Q9H161 RPL21P5-201ENST00000554662 472 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.08□□□□□ -2.24
ALX4Q9H161 MIR8070-201ENST00000616510 88 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 AC019226.2-201ENST00000625973 424 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 U4.7-201ENST00000638126 106 ntBASIC1.08□□□□□ -2.24
ALX4Q9H161 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.08□□□□□ -2.24
ALX4Q9H161 LINC02555-201ENST00000563933 1951 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU6-179P-201ENST00000363350 107 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU6-1285P-201ENST00000363480 105 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 SNORD114-6-201ENST00000364393 72 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 Y_RNA.332-201ENST00000365271 113 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU6-925P-201ENST00000384629 104 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU1-78P-201ENST00000391248 165 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU6-607P-201ENST00000411283 108 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 AC004965.1-201ENST00000413033 213 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 CALM2P2-201ENST00000428512 440 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.07□□□□□ -2.24
ALX4Q9H161 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.07□□□□□ -2.24
ALX4Q9H161 MTCO1P44-201ENST00000441935 243 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 HMGN2P18-201ENST00000450680 270 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 RNU1-131P-201ENST00000458943 161 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 MTCYBP18-201ENST00000501056 747 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 AC022447.4-201ENST00000504053 364 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 MTND3P25-201ENST00000509243 135 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.07□□□□□ -2.24
ALX4Q9H161 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.07□□□□□ -2.24
ALX4Q9H161 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.07□□□□□ -2.24
ALX4Q9H161 MIR4421-201ENST00000578133 69 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 AC073539.2-201ENST00000597113 165 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 AL359740.1-201ENST00000624340 592 ntBASIC1.07□□□□□ -2.24
ALX4Q9H161 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.07□□□□□ -2.24
ALX4Q9H161 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
ALX4Q9H161 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ALX4Q9H161 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AL391987.6-201ENST00000305671 199 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RNU6-500P-201ENST00000362349 107 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RNY1P12-201ENST00000364251 105 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RPL23AP32-201ENST00000395315 459 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RNU2-3P-201ENST00000410144 191 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RNU2-8P-201ENST00000410727 190 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RNU6-1245P-201ENST00000411130 106 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AC000111.3-201ENST00000433478 193 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 MTND2P4-201ENST00000445034 1004 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 TAF9P1-201ENST00000445421 515 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 TAF9P2-201ENST00000454958 515 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 SNRPFP4-201ENST00000456366 242 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.06□□□□□ -2.24
ALX4Q9H161 AC087477.1-201ENST00000465747 340 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AC104806.1-201ENST00000508720 308 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AC005741.1-201ENST00000511094 432 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 MTND3P5-201ENST00000512798 333 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 Y_RNA.672-201ENST00000516289 104 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AP003033.1-201ENST00000527244 415 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AL034555.1-201ENST00000604816 211 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AL451064.1-201ENST00000607718 471 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 AP000240.1-201ENST00000609910 452 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ALX4Q9H161 AL157834.3-201ENST00000615543 103 ntBASIC1.06□□□□□ -2.24
ALX4Q9H161 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ALX4Q9H161 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ALX4Q9H161 RNU4-15P-201ENST00000362613 141 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 RNU6-105P-201ENST00000363909 104 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 MTATP6P19-201ENST00000413797 659 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.05□□□□□ -2.24
ALX4Q9H161 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.05□□□□□ -2.24
ALX4Q9H161 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.05□□□□□ -2.24
ALX4Q9H161 AC130509.1-201ENST00000464158 433 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.05□□□□□ -2.24
ALX4Q9H161 AC074344.1-201ENST00000512823 224 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AC022616.3-201ENST00000523940 148 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.05□□□□□ -2.24
ALX4Q9H161 AC002400.1-201ENST00000569310 726 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.05□□□□□ -2.24
ALX4Q9H161 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.05□□□□□ -2.24
ALX4Q9H161 HMGN1P30-201ENST00000589286 268 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 AC027807.2-201ENST00000616099 408 ntBASIC1.05□□□□□ -2.24
ALX4Q9H161 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms