Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CLPBQ9H078 SNORD114-19-201ENST00000363072 75 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RNU6-1141P-201ENST00000364520 107 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 Y_RNA.384-201ENST00000383909 102 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RNU6-1297P-201ENST00000384415 104 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 MIR544A-201ENST00000384855 91 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 MIR181A2-201ENST00000384863 110 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RNU6-1140P-201ENST00000410517 106 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RPL19P1-201ENST00000411635 428 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 MTND3P9-201ENST00000429526 346 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 MTND3P23-201ENST00000431980 347 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 AC087499.2-201ENST00000432861 149 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.81□□□□□ -1.96
CLPBQ9H078 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPBQ9H078 snoU13.14-201ENST00000459372 104 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RNU6-559P-201ENST00000516151 98 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.81□□□□□ -1.96
CLPBQ9H078 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPBQ9H078 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.81□□□□□ -1.96
CLPBQ9H078 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPBQ9H078 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.81□□□□□ -1.96
CLPBQ9H078 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.81□□□□□ -1.96
CLPBQ9H078 AC011494.1-201ENST00000596454 237 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 RPL23AP88-201ENST00000605759 454 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 MIR3976-201ENST00000606807 139 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.81□□□□□ -1.96
CLPBQ9H078 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPBQ9H078 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLPBQ9H078 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLPBQ9H078 KPNA2P1-201ENST00000458289 1591 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RNU6-1285P-201ENST00000363480 105 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RNU6-43P-201ENST00000384302 107 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 BTF3L4P2-201ENST00000392798 346 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AL591034.2-201ENST00000402839 359 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AL139095.1-201ENST00000404326 391 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RN7SKP61-201ENST00000410642 295 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RNU6-1328P-201ENST00000410938 106 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RNU6-370P-201ENST00000411008 104 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLPBQ9H078 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 USP9YP30-201ENST00000430729 455 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 FTH1P25-201ENST00000447665 469 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 RPL36AP48-201ENST00000485521 314 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RPL22P13-201ENST00000493291 347 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 AC008549.1-201ENST00000512900 643 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 RNA5SP112-201ENST00000515937 99 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 ACA59.1-201ENST00000515966 143 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 Y_RNA.708-201ENST00000516950 96 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 FRG2DP-202ENST00000566967 323 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC105137.2-201ENST00000569073 466 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPBQ9H078 MIR4795-201ENST00000584182 89 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AP000654.2-201ENST00000605633 586 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 AC007792.1-201ENST00000623023 402 ntBASIC2.8□□□□□ -1.96
CLPBQ9H078 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CLPBQ9H078 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.8□□□□□ -1.96
CLPBQ9H078 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLPBQ9H078 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AC138915.1-201ENST00000565427 1685 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
CLPBQ9H078 MIR449A-201ENST00000362113 91 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNU4-79P-201ENST00000362764 141 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNU6-1188P-201ENST00000363795 107 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNU6-784P-201ENST00000384330 106 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 MIR521-1-201ENST00000384902 87 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 Y_RNA.594-201ENST00000410373 140 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNU6-174P-201ENST00000410406 106 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNA5SP184-201ENST00000411071 108 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.79□□□□□ -1.96
CLPBQ9H078 Z98742.2-201ENST00000431564 187 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AC009296.1-201ENST00000443146 155 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RPL39P29-201ENST00000447779 157 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPBQ9H078 Y_RNA.632-201ENST00000459189 102 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AC112771.1-201ENST00000463581 102 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RPL30P12-201ENST00000474666 353 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 Y_RNA.670-201ENST00000516255 105 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPBQ9H078 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPBQ9H078 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPBQ9H078 MIR7157-201ENST00000635801 60 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 MIR7515-201ENST00000637837 67 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CLPBQ9H078 AP000560.1-201ENST00000624150 1937 ntBASIC2.79□□□□□ -1.96
CLPBQ9H078 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.79□□□□□ -1.96
CLPBQ9H078 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.79□□□□□ -1.96
CLPBQ9H078 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
CLPBQ9H078 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.78□□□□□ -1.96
CLPBQ9H078 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
CLPBQ9H078 RNU6-486P-201ENST00000363116 107 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms