Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU6-4P-201ENST00000384205 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-5P-201ENST00000384238 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-3P-201ENST00000384314 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-16P-201ENST00000384385 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-15P-201ENST00000384534 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1127P-201ENST00000384580 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-2-201ENST00000384627 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-29P-201ENST00000384637 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-606P-201ENST00000384721 111 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-9-201ENST00000384776 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-33P-201ENST00000384793 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 SNORA16.2-201ENST00000390991 127 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 SNORD70.1-201ENST00000391007 85 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU4-46P-201ENST00000410818 138 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 MTATP6P17-201ENST00000431030 672 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 IFNA20P-201ENST00000436840 528 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 MTCO1P19-201ENST00000443487 500 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC010095.1-201ENST00000443543 144 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC022364.2-201ENST00000457963 554 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 YWHAEP4-201ENST00000505390 198 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 MTCO3P7-201ENST00000510008 774 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC010486.3-201ENST00000511602 785 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 GNAI2P1-201ENST00000541815 315 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AL391840.1-201ENST00000571144 367 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC123912.5-201ENST00000605470 343 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 RNU6-6P-201ENST00000606623 107 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 AC109347.2-201ENST00000610220 349 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.8□□□□□ -2.12
POLR1EQ9GZS1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1222P-201ENST00000384615 107 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC068050.1-201ENST00000394891 380 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 RNU6-956P-201ENST00000458868 103 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC104564.1-201ENST00000493028 407 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC093259.1-201ENST00000509755 300 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 RNU2-69P-201ENST00000516061 100 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 RNU6-991P-201ENST00000516168 107 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC115990.1-201ENST00000526957 301 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC008752.3-201ENST00000588113 712 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC110760.3-201ENST00000598794 467 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AL158827.2-201ENST00000602494 330 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AP000654.2-201ENST00000605633 586 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 AL691447.3-201ENST00000635020 330 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 ELL2P3-201ENST00000457883 1602 ntBASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
POLR1EQ9GZS1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 RNU6-393P-201ENST00000384475 107 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 Y_RNA.553-201ENST00000384670 102 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 MIR1289-2-201ENST00000408360 111 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 VN1R36P-201ENST00000414936 291 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 MTATP6P18-201ENST00000417994 673 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 RN7SKP219-201ENST00000516825 296 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AK6P1-201ENST00000540219 478 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 MTATP6P3-201ENST00000581686 676 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AC068790.2-201ENST00000602601 557 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AC130454.1-201ENST00000622948 401 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 AC022418.1-201ENST00000624118 445 ntBASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
POLR1EQ9GZS1 RNU6-1120P-201ENST00000362988 108 ntBASIC1.77□□□□□ -2.13
POLR1EQ9GZS1 RNU6-23P-201ENST00000363283 107 ntBASIC1.77□□□□□ -2.13
POLR1EQ9GZS1 RNU6-105P-201ENST00000363909 104 ntBASIC1.77□□□□□ -2.13
POLR1EQ9GZS1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.77□□□□□ -2.13
POLR1EQ9GZS1 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms