Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC008752.3-201ENST00000588113 712 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC078795.2-201ENST00000602835 1252 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC012507.3-201ENST00000603556 477 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC015540.1-201ENST00000615828 501 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AL158209.2-201ENST00000619266 216 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 MIR7843-201ENST00000622274 79 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC124864.2-201ENST00000624736 186 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RNU6-384P-201ENST00000364900 104 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RNU6-611P-201ENST00000384276 104 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AC068050.1-201ENST00000394891 380 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 USP9YP18-201ENST00000425912 695 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AC000111.3-201ENST00000433478 193 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 snoU13.23-201ENST00000458863 104 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RNU7-63P-201ENST00000459054 62 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AC104136.1-201ENST00000512969 394 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RN7SKP219-201ENST00000516825 296 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 RNU6-667P-201ENST00000517186 102 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AP005435.4-201ENST00000529514 284 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AP001330.5-201ENST00000607176 411 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AP001596.2-201ENST00000608410 312 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 MIR6863-201ENST00000636112 90 ntBASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CCSER1Q9C0I3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 Y_RNA.41-201ENST00000362646 102 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 RNU6-546P-201ENST00000383991 107 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 RNU6-517P-201ENST00000384362 110 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 RNU6-1158P-201ENST00000391167 107 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MTCO3P40-201ENST00000392516 676 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MIR1294-201ENST00000408503 142 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MTND1P1-201ENST00000445453 368 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AP001893.2-201ENST00000526949 202 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 BNIP3P6-201ENST00000549284 499 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MTATP6P3-201ENST00000581686 676 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC073539.2-201ENST00000597113 165 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MIR6845-201ENST00000613182 61 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC139792.3-201ENST00000623525 224 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 AC068137.4-201ENST00000638485 296 ntBASIC2.03□□□□□ -2.08
CCSER1Q9C0I3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 U3.13-201ENST00000364804 214 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU6-715P-201ENST00000365204 103 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU6-996P-201ENST00000365438 107 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU6-45P-201ENST00000384471 107 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 MIR583-201ENST00000384846 75 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU6-903P-201ENST00000391270 109 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU2-32P-201ENST00000411193 191 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AL669831.1-202ENST00000428504 417 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 TIMM9P3-201ENST00000428659 274 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AL591043.1-201ENST00000432461 424 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 GTF2IP13-201ENST00000438487 386 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AL163973.1-201ENST00000484753 577 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AC091435.1-201ENST00000505442 584 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AC079140.5-201ENST00000507882 310 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AC116337.1-201ENST00000509680 687 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 LRRC34P2-201ENST00000514850 553 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 Y_RNA.655-201ENST00000515919 96 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU1-86P-201ENST00000516108 154 ntBASIC2.02□□□□□ -2.09
CCSER1Q9C0I3 RNU1-107P-201ENST00000516617 154 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms