Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-467P-201ENST00000517027 110 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC091135.1-201ENST00000585943 307 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC024940.5-201ENST00000622889 474 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AL442644.1-201ENST00000454390 3105 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 Y_RNA.192-201ENST00000363977 102 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 SNORA29-201ENST00000384183 140 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 RNU6-298P-201ENST00000390888 96 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 AL161935.2-201ENST00000414627 60 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 AC009646.1-201ENST00000510455 318 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 SNORA43.2-201ENST00000516652 128 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 SNORD60.2-201ENST00000516883 86 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 MIR3146-201ENST00000580367 79 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 AC112220.3-201ENST00000605502 502 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 U6.42-201ENST00000618440 107 ntBASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
UPF3BQ9BZI7 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 RNU6-946P-201ENST00000383878 107 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 OR2AQ1P-201ENST00000451972 200 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 snoU109.2-201ENST00000459316 135 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 RNU2-10P-201ENST00000516375 211 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 RNA5SP384-201ENST00000516615 116 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC091163.3-201ENST00000518269 1144 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AL021368.1-201ENST00000607490 540 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AL355816.2-201ENST00000610049 647 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC063943.3-201ENST00000615562 356 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC006386.1-201ENST00000619436 415 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 MIR8063-201ENST00000621930 81 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC010487.4-201ENST00000637027 61 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 AC092104.1-201ENST00000497346 1441 ntBASIC1.06□□□□□ -2.24
UPF3BQ9BZI7 Y_RNA.110-201ENST00000363220 99 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 SNORD32B-201ENST00000364460 84 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 MIR520A-201ENST00000384862 85 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 RNU4-22P-201ENST00000411058 166 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AC123900.1-201ENST00000420390 96 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 RNA5SP481-201ENST00000516814 122 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AC015688.6-201ENST00000577737 104 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 AC018889.1-201ENST00000605372 397 ntBASIC1.05□□□□□ -2.24
UPF3BQ9BZI7 SNORD114-23-201ENST00000363536 72 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 RNY3P13-201ENST00000365542 102 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 MIR10A-201ENST00000385043 110 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 MTND1P30-201ENST00000441241 901 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AL133373.1-201ENST00000497098 94 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC005741.1-201ENST00000511094 432 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC115990.1-201ENST00000526957 301 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 MIR544B-201ENST00000582372 78 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AL391001.1-201ENST00000602747 715 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC068620.3-201ENST00000602749 560 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 AC099786.3-201ENST00000565735 1410 ntBASIC1.04□□□□□ -2.24
UPF3BQ9BZI7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RNU6-17P-201ENST00000384245 107 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RNU6-18P-201ENST00000384527 107 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RNU11-5P-201ENST00000391216 129 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC006366.1-201ENST00000422002 759 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AL008629.1-201ENST00000438615 184 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AL117351.1-201ENST00000438864 766 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RPS27AP8-201ENST00000452665 445 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC134050.1-201ENST00000495088 933 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC112206.3-201ENST00000514578 389 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC010376.1-201ENST00000522101 334 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 BNIP3P6-201ENST00000549284 499 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC090115.3-201ENST00000553218 849 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 MTND4LP25-201ENST00000570218 163 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 FAM71BP1-201ENST00000604431 523 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 AL359547.2-201ENST00000615810 418 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms