Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC098826.3-201ENST00000603823 466 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 AL161798.1-201ENST00000604630 131 ntBASIC3.39□□□□□ -1.87
SALL3Q9BXA9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 MIR412-201ENST00000362142 91 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 MIR26A1-201ENST00000362205 77 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.257-201ENST00000364596 102 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU4-42P-201ENST00000364738 142 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 U8.8-201ENST00000365399 135 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU6-26P-201ENST00000383985 107 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 MIR514A1-201ENST00000385133 98 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU6-325P-201ENST00000411132 105 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 PGBD4P6-201ENST00000421501 610 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RPS20P22-201ENST00000473700 357 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU6-1143P-201ENST00000516125 104 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RNU6-911P-201ENST00000516523 104 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC022080.3-201ENST00000544433 482 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 TRAV32-201ENST00000553993 340 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AC002076.2-201ENST00000617362 122 ntBASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SALL3Q9BXA9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.210-201ENST00000364161 110 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RNU6-933P-201ENST00000384424 107 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AL513475.1-201ENST00000406602 315 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 EIF4EP2-201ENST00000422816 654 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC133134.1-201ENST00000466800 359 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 KC877373.1-201ENST00000479066 408 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC114801.2-201ENST00000503825 781 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC105758.1-201ENST00000506038 399 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RNU2-53P-201ENST00000516257 147 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RNA5SP471-201ENST00000516971 106 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC040926.1-201ENST00000530195 238 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 CBX3P8-201ENST00000532412 525 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 MED28P6-201ENST00000558776 231 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC002545.1-201ENST00000592511 181 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 VN1R91P-201ENST00000594377 169 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 MIR7106-201ENST00000612419 65 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 AC006111.3-201ENST00000622137 383 ntBASIC3.37□□□□□ -1.87
SALL3Q9BXA9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SALL3Q9BXA9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.288-201ENST00000364854 92 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MIR625-201ENST00000385047 85 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MYL8P-204ENST00000431574 518 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 FCF1P4-201ENST00000448326 183 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 CHEK2P4-201ENST00000450340 246 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 FABP5P15-201ENST00000453566 214 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 RNA5SP310-201ENST00000459084 116 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 RPL9P9-202ENST00000466501 579 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AL160314.1-201ENST00000490836 438 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC107222.1-201ENST00000510899 637 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 SNORA9.3-201ENST00000516383 129 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MIR5696-201ENST00000578474 85 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MIR5701-3-201ENST00000578890 82 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MIR5701-1-201ENST00000585138 82 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 ZNF861P-201ENST00000588126 639 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC005357.1-201ENST00000588399 301 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 MIR5701-2-201ENST00000615634 82 ntBASIC3.36□□□□□ -1.87
SALL3Q9BXA9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SALL3Q9BXA9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms