Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RNU1-138P-201ENST00000384093 164 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RNU6-166P-201ENST00000384371 107 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 MIR548K-201ENST00000408406 116 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 CYCSP33-201ENST00000414485 327 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC097463.2-201ENST00000421074 142 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 MTND1P14-201ENST00000427400 950 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 RNU1-86P-201ENST00000516108 154 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RNU1-107P-201ENST00000516617 154 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RNU6-566P-201ENST00000516790 107 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RNA5SP454-201ENST00000517231 127 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 AP005902.1-201ENST00000521358 186 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC091544.4-201ENST00000555268 342 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 POLR3GP2-201ENST00000588366 668 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 RMST_4.1-201ENST00000616886 107 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP2Q99959 AC244517.12-201ENST00000623581 663 ntBASIC2.42□□□□□ -2.02
PKP2Q99959 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
PKP2Q99959 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PKP2Q99959 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
PKP2Q99959 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PKP2Q99959 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PKP2Q99959 Y_RNA.67-201ENST00000362870 100 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 SNORD3E-201ENST00000362899 217 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP2Q99959 SNORD116-11-201ENST00000383882 92 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 MIR518D-201ENST00000385014 87 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PKP2Q99959 MIR548F5-201ENST00000408421 86 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 RPS20P15-201ENST00000412792 311 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 AL592148.1-201ENST00000413568 445 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.41□□□□□ -2.02
PKP2Q99959 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC011005.2-201ENST00000487324 359 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 AC079140.5-201ENST00000507882 310 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 RNA5SP367-201ENST00000516557 118 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 RNU6-323P-201ENST00000521915 107 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 COPS8P3-201ENST00000526024 482 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 AP005639.2-201ENST00000527592 928 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PKP2Q99959 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC113139.1-201ENST00000605049 239 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 AL050343.2-201ENST00000607338 280 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PKP2Q99959 AC024581.2-201ENST00000619986 252 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 MIR7843-201ENST00000622274 79 ntBASIC2.41□□□□□ -2.02
PKP2Q99959 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
PKP2Q99959 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 Y_RNA.387-201ENST00000383918 102 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 AL138827.1-201ENST00000402666 306 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.4□□□□□ -2.03
PKP2Q99959 RPS3AP52-201ENST00000435639 297 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 MTND1P17-201ENST00000448961 204 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.4□□□□□ -2.03
PKP2Q99959 Y_RNA.632-201ENST00000459189 102 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 RPS29P26-201ENST00000477483 171 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 HMGB1P30-201ENST00000492455 606 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.4□□□□□ -2.03
PKP2Q99959 MTND5P5-201ENST00000503764 376 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.4□□□□□ -2.03
PKP2Q99959 SMURF2P1-201ENST00000514992 481 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 SNORA25.11-201ENST00000515935 105 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 RNU6-1332P-201ENST00000516666 104 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 AC087854.1-201ENST00000519706 414 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
PKP2Q99959 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
PKP2Q99959 AC138627.2-201ENST00000624202 601 ntBASIC2.4□□□□□ -2.03
PKP2Q99959 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PKP2Q99959 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PKP2Q99959 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKP2Q99959 MIR412-201ENST00000362142 91 ntBASIC2.39□□□□□ -2.03
PKP2Q99959 RNU6-384P-201ENST00000364900 104 ntBASIC2.39□□□□□ -2.03
PKP2Q99959 Y_RNA.324-201ENST00000365165 102 ntBASIC2.39□□□□□ -2.03
PKP2Q99959 Y_RNA.384-201ENST00000383909 102 ntBASIC2.39□□□□□ -2.03
PKP2Q99959 RNU6-128P-201ENST00000383976 107 ntBASIC2.39□□□□□ -2.03
PKP2Q99959 Y_RNA.460-201ENST00000384255 102 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms