Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RNFT1P2-201ENST00000443064 757 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 HAR1A.1-201ENST00000459583 118 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 RPS26P45-201ENST00000471748 340 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 AC107982.1-201ENST00000507171 1300 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 RNA5SP437-201ENST00000517249 129 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 AC090330.1-201ENST00000588646 764 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 AL158163.2-201ENST00000619110 700 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 MIR6759-201ENST00000638110 65 ntBASIC0.35□□□□□ -2.35
CDK5RAP2Q96SN8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CDK5RAP2Q96SN8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
CDK5RAP2Q96SN8 Y_RNA.274-201ENST00000364714 101 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-438P-201ENST00000365561 103 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-1122P-201ENST00000384449 107 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AL356776.1-201ENST00000406574 447 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 snoU13.30-201ENST00000458951 104 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AC005741.1-201ENST00000511094 432 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-197P-201ENST00000516680 100 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 SUMO2P18-201ENST00000518873 252 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AL442163.3-201ENST00000554110 156 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 7SK.7-201ENST00000603504 247 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AC090578.1-201ENST00000604955 591 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
CDK5RAP2Q96SN8 AL669831.1-202ENST00000428504 417 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC024589.1-201ENST00000512207 263 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 RNA5SP337-201ENST00000517007 109 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC104417.1-201ENST00000523974 751 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AL356057.1-201ENST00000533798 831 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC107304.1-201ENST00000604229 296 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC010615.1-201ENST00000594254 1764 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-1284P-201ENST00000363701 100 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 SNORD18A-201ENST00000363753 72 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 MIR942-201ENST00000401111 86 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC019070.1-201ENST00000415008 1024 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC097473.1-201ENST00000508142 408 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 AC010975.3-201ENST00000618727 978 ntBASIC0.33□□□□□ -2.36
CDK5RAP2Q96SN8 MTND4P21-201ENST00000453886 1357 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 MTND4P16-201ENST00000466108 1367 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 SNORA63D-201ENST00000364359 132 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-650P-201ENST00000365658 111 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 AL590556.1-201ENST00000423231 483 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 MTND1P31-201ENST00000449206 961 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 MTCO3P28-201ENST00000513351 515 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 SNRPGP1-201ENST00000553864 222 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 AL590229.1-201ENST00000603497 542 ntBASIC0.32□□□□□ -2.36
CDK5RAP2Q96SN8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 MTCO1P21-201ENST00000416634 589 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 COX6CP10-201ENST00000416832 224 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC245047.7-201ENST00000440265 293 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 RPS27AP8-201ENST00000452665 445 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC091435.1-201ENST00000505442 584 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC093012.1-202ENST00000549403 582 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC012557.2-201ENST00000605919 418 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC104465.1-201ENST00000611365 139 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AL606517.1-201ENST00000446914 387 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 MTND1P3-201ENST00000484956 952 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 EIF4A1P12-201ENST00000551910 141 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC098483.2-201ENST00000603158 454 ntBASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.31□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-701P-201ENST00000384059 107 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 Y_RNA.476-201ENST00000384347 108 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-278P-201ENST00000390945 109 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 RNU6-575P-201ENST00000411326 105 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 AC092423.1-201ENST00000430165 186 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 AL162395.1-201ENST00000457882 422 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 AP001893.2-201ENST00000526949 202 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 AL133153.1-201ENST00000557756 303 ntBASIC0.3□□□□□ -2.36
CDK5RAP2Q96SN8 MIR4667-201ENST00000578933 66 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms