Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC079600.2-201ENST00000550076 130 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 PRELID2P1-201ENST00000552837 301 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC026271.5-201ENST00000577873 130 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 LARP7P3-201ENST00000579888 337 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2□□□□□ -2.09
RAB40CQ96S21 AL034555.1-201ENST00000604816 211 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AL356157.2-201ENST00000605122 111 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2□□□□□ -2.09
RAB40CQ96S21 AC090517.2-201ENST00000614966 680 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 FAM157A-202ENST00000615155 405 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC098679.4-201ENST00000624241 654 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC006386.2-201ENST00000624491 75 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC012005.1-201ENST00000624575 75 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 SNORD98-201ENST00000636377 67 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2□□□□□ -2.09
RAB40CQ96S21 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RAB40CQ96S21 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2□□□□□ -2.09
RAB40CQ96S21 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RAB40CQ96S21 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 RNU6-534P-201ENST00000364877 106 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 Y_RNA.295-201ENST00000364918 102 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 Y_RNA.453-201ENST00000384223 109 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 RNU6-332P-201ENST00000391193 108 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 HMGN2P39-201ENST00000398005 273 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 MIR450B-201ENST00000401182 78 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AL356057.3-201ENST00000402607 340 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 RN7SKP61-201ENST00000410642 295 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 RPL23AP95-201ENST00000426806 265 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 NDUFA5P4-201ENST00000436704 385 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 UBE2V1P8-201ENST00000437166 265 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC018868.1-201ENST00000491307 315 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC096725.1-201ENST00000514266 313 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC107953.1-201ENST00000522216 297 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 MIR3136-201ENST00000583498 78 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 CTHRC1P1-201ENST00000605383 469 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC104458.1-201ENST00000608243 463 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 MIR7106-201ENST00000612419 65 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 MIR3688-2-201ENST00000636963 87 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RAB40CQ96S21 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.99□□□□□ -2.09
RAB40CQ96S21 AC027514.1-201ENST00000588561 1603 ntBASIC1.99□□□□□ -2.09
RAB40CQ96S21 MTND4P23-201ENST00000447723 1363 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC005336.3-201ENST00000623833 2679 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40CQ96S21 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40CQ96S21 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40CQ96S21 SNORD113-7-201ENST00000363762 77 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6-944P-201ENST00000364023 107 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6-192P-201ENST00000391253 100 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6-373P-201ENST00000411247 98 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 AL590135.1-201ENST00000422215 156 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC019205.3-201ENST00000424573 156 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC078809.1-201ENST00000427601 140 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RPL32P28-201ENST00000443577 397 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC016700.2-201ENST00000446011 156 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC015911.1-201ENST00000495111 156 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC016632.1-201ENST00000503994 196 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC091874.1-201ENST00000511402 339 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC092436.3-201ENST00000511788 257 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RN7SKP132-201ENST00000516001 208 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6-718P-201ENST00000516166 105 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 RNU6-612P-201ENST00000516909 102 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 GTF3AP2-201ENST00000557014 266 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC018889.1-201ENST00000605372 397 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC068944.2-201ENST00000610373 403 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC063943.3-201ENST00000615562 356 ntBASIC1.98□□□□□ -2.09
RAB40CQ96S21 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40CQ96S21 AC092268.1-201ENST00000342691 405 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 RNU6-1252P-201ENST00000363054 104 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms