Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL353997.5-201ENST00000618886 171 ntBASIC2.58□□□□□ -2
NEK1Q96PY6 AC138627.2-201ENST00000624202 601 ntBASIC2.58□□□□□ -2
NEK1Q96PY6 AC024614.3-201ENST00000637860 256 ntBASIC2.58□□□□□ -2
NEK1Q96PY6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.58□□□□□ -2
NEK1Q96PY6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
NEK1Q96PY6 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 SNORD56-201ENST00000413522 71 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC074117.2-201ENST00000417130 397 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 RPL7P12-201ENST00000446719 750 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.57□□□□□ -2
NEK1Q96PY6 RNU6-1208P-201ENST00000459588 107 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.57□□□□□ -2
NEK1Q96PY6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.57□□□□□ -2
NEK1Q96PY6 AC083904.1-201ENST00000487828 231 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.57□□□□□ -2
NEK1Q96PY6 RNU6-377P-201ENST00000515965 102 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.57□□□□□ -2
NEK1Q96PY6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.57□□□□□ -2
NEK1Q96PY6 RPS3AP23-202ENST00000574601 686 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 MIR5002-201ENST00000584713 97 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AP000907.4-201ENST00000604143 237 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC021646.1-201ENST00000605469 484 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.57□□□□□ -2
NEK1Q96PY6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.57□□□□□ -2
NEK1Q96PY6 AC103705.1-201ENST00000619013 241 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 AC097372.5-201ENST00000623665 376 ntBASIC2.57□□□□□ -2
NEK1Q96PY6 Y_RNA.256-201ENST00000364594 104 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RNU6-534P-201ENST00000364877 106 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RNU6-843P-201ENST00000384454 104 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RNU6-220P-201ENST00000390919 107 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RNU6-332P-201ENST00000391193 108 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 Y_RNA.615-201ENST00000410769 117 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AL591043.1-201ENST00000432461 424 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC117503.1-201ENST00000472241 394 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 MTND1P5-201ENST00000517906 940 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 MTND4LP26-201ENST00000518144 282 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.56□□□□□ -2
NEK1Q96PY6 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.56□□□□□ -2
NEK1Q96PY6 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.56□□□□□ -2
NEK1Q96PY6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.56□□□□□ -2
NEK1Q96PY6 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AL357078.3-201ENST00000607528 618 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 RMST_3.1-201ENST00000611651 109 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC007014.2-201ENST00000615581 479 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
NEK1Q96PY6 MIR6132-201ENST00000622083 109 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 MIR6873-201ENST00000622788 63 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC244517.12-201ENST00000623581 663 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 AC012640.5-201ENST00000623897 319 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
NEK1Q96PY6 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 MTND4P5-201ENST00000435821 1374 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.55□□□□□ -2
NEK1Q96PY6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.55□□□□□ -2
NEK1Q96PY6 AC018437.1-201ENST00000492214 406 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.55□□□□□ -2
NEK1Q96PY6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC107222.1-201ENST00000510899 637 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 SNORA31.23-201ENST00000517219 133 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
NEK1Q96PY6 RNU6-323P-201ENST00000521915 107 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.55□□□□□ -2
NEK1Q96PY6 AP000763.2-201ENST00000540641 163 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC026464.5-201ENST00000562497 722 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 MIR5571-201ENST00000577998 113 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC107304.1-201ENST00000604229 296 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.55□□□□□ -2
NEK1Q96PY6 AC096772.1-201ENST00000609146 564 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 AC092794.1-201ENST00000612734 582 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 U6atac.1-201ENST00000616025 117 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.55□□□□□ -2
NEK1Q96PY6 MIR3662-201ENST00000637030 95 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 U4.7-201ENST00000638126 106 ntBASIC2.55□□□□□ -2
NEK1Q96PY6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
NEK1Q96PY6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.54□□□□□ -2
NEK1Q96PY6 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 RNU6-428P-201ENST00000362942 107 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 MIR1277-201ENST00000408536 78 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
NEK1Q96PY6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 SNRPEP10-201ENST00000420249 274 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AC097463.2-201ENST00000421074 142 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.54□□□□□ -2
NEK1Q96PY6 RPS3AP44-201ENST00000425466 790 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 SMURF2P1-201ENST00000514992 481 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 SNORA19.2-201ENST00000516013 114 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
NEK1Q96PY6 AL133241.1-201ENST00000556832 487 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AC105245.1-201ENST00000581934 244 ntBASIC2.54□□□□□ -2
NEK1Q96PY6 AL121917.1-203ENST00000605534 577 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms