Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC006028.1-201ENST00000438379 402 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 RNA5SP246-201ENST00000458909 119 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AC091874.1-201ENST00000511402 339 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 SNORA40.13-201ENST00000516379 120 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 HSPE1P4-201ENST00000550617 308 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AL161798.1-201ENST00000604630 131 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 AL442128.1-201ENST00000615151 90 ntBASIC4.84□□□□□ -1.63
TRIM47Q96LD4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TRIM47Q96LD4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM47Q96LD4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 U3.9-201ENST00000363823 204 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNU6-105P-201ENST00000363909 104 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNU6-356P-201ENST00000384140 107 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNU6-1152P-201ENST00000384576 107 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNA5SP225-201ENST00000410874 135 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 MLLT10P1-201ENST00000418346 262 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 SAGE2P-201ENST00000420011 2126 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 RNU6-412P-201ENST00000516434 106 ntBASIC4.83□□□□□ -1.64
TRIM47Q96LD4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM47Q96LD4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 RNU6-942P-201ENST00000363002 107 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 RNU6-873P-201ENST00000363833 107 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 MIR491-201ENST00000384877 84 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 U3.19-201ENST00000390893 196 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 RNU6-1228P-201ENST00000391014 107 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.617-201ENST00000410920 90 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AL513331.1-201ENST00000411908 397 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 ABCF2P2-201ENST00000450549 296 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC146507.2-201ENST00000460608 476 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 RNU6-781P-201ENST00000516377 101 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 RNU6-1198P-201ENST00000516904 67 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC134878.1-201ENST00000619901 243 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC012640.5-201ENST00000623897 319 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC099654.7-201ENST00000635788 2127 ntBASIC4.82□□□□□ -1.64
TRIM47Q96LD4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TRIM47Q96LD4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RNU6-324P-201ENST00000363957 106 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RNU6-1107P-201ENST00000364817 104 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.346-201ENST00000365385 112 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 MIR450A2-201ENST00000385022 100 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 MIR526A2-201ENST00000390198 65 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 AL355497.1-201ENST00000406262 551 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 U6atac.2-201ENST00000408644 118 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 HLA-N-201ENST00000437516 135 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 HMGB3P8-201ENST00000449709 577 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RPS26P45-201ENST00000471748 340 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RNU6-436P-201ENST00000516171 114 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 RNU6-970P-201ENST00000516312 107 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 AC006199.1-201ENST00000548728 219 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 MIR3200-201ENST00000580767 85 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 AC120024.3-201ENST00000603167 156 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 MIR7151-201ENST00000617477 60 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 AC024581.2-201ENST00000619986 252 ntBASIC4.81□□□□□ -1.64
TRIM47Q96LD4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM47Q96LD4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 AC018529.3-201ENST00000624212 2254 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 AL592182.3-201ENST00000642132 3304 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 SNORD115-8-201ENST00000363856 82 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.229-201ENST00000364347 113 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 SNORD115-38-201ENST00000365037 82 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RNU6-597P-201ENST00000365620 102 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RNU6-142P-201ENST00000384019 107 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RNU6-1310P-201ENST00000384153 107 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RNY1P7-201ENST00000384743 110 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 ELOCP21-201ENST00000412558 336 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 RPL23AP46-201ENST00000438548 490 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms