Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AC002546.1-201ENST00000588041 2504 ntBASIC3.47□□□□□ -1.85
PHACTR3Q96KR7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.47□□□□□ -1.85
PHACTR3Q96KR7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PHACTR3Q96KR7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNU4-82P-201ENST00000362443 140 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNU6-778P-201ENST00000363269 103 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNU6-99P-201ENST00000364721 107 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNU6-790P-201ENST00000384479 105 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 SNORA67.4-201ENST00000384688 142 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 MIR518D-201ENST00000385014 87 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 EIF4EP2-201ENST00000422816 654 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AL353752.1-201ENST00000454946 260 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RPL9P9-202ENST00000466501 579 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 FO393415.2-201ENST00000480085 343 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNA5SP282-201ENST00000516355 108 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 RNU6-264P-201ENST00000517134 104 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AC109479.2-201ENST00000517842 174 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AC004817.2-201ENST00000561794 651 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 MIR4635-201ENST00000583759 79 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 VN1R107P-201ENST00000601784 209 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 MIR8076-201ENST00000611401 83 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 U4.7-201ENST00000638126 106 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 AC008669.1-201ENST00000565823 2178 ntBASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PHACTR3Q96KR7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.47-201ENST00000362697 108 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 SNORD50.1-201ENST00000362987 71 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 RNY1P16-201ENST00000363063 111 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.106-201ENST00000363189 100 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 RNU6-72P-201ENST00000384285 79 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 RNU6-140P-201ENST00000384566 108 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 MIR325-201ENST00000385260 98 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 MTCYBP10-201ENST00000424905 650 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC010655.3-201ENST00000478818 450 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC105758.1-201ENST00000506038 399 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC096725.1-201ENST00000514266 313 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 ACA59.1-201ENST00000515966 143 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 SNORA9.3-201ENST00000516383 129 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC103996.1-201ENST00000555468 102 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC008269.2-201ENST00000561915 1105 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 MIR3149-201ENST00000584629 83 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 AC008121.1-201ENST00000603244 268 ntBASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PHACTR3Q96KR7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AC022336.2-201ENST00000568966 2538 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AC007256.1-201ENST00000392253 2765 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 RNU6-595P-201ENST00000363944 107 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 RNU4-42P-201ENST00000364738 142 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.533-201ENST00000384596 114 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 MIR591-201ENST00000385290 95 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 RNU6-1156P-201ENST00000410365 100 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 RPS15AP10-201ENST00000432472 382 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL731563.1-201ENST00000442202 214 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL031274.1-201ENST00000450334 232 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 MTATP6P7-201ENST00000453315 681 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AC079354.2-201ENST00000453523 154 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 SNORA40.14-201ENST00000516543 86 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.721-201ENST00000517207 102 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PHACTR3Q96KR7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 RNU6-428P-201ENST00000362942 107 ntBASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.149-201ENST00000363558 117 ntBASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 RNA5SP126-201ENST00000365092 109 ntBASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 RNU6-26P-201ENST00000383985 107 ntBASIC3.43□□□□□ -1.86
PHACTR3Q96KR7 Y_RNA.574-201ENST00000384766 95 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms