Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 DEFB131C-201ENST00000528817 165 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 MIR5047-201ENST00000579212 100 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 MIR5006-201ENST00000583027 110 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 MIR3138-201ENST00000585238 82 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 AC114781.5-201ENST00000615297 108 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 AC090517.3-201ENST00000625170 141 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
CCDC97Q96F63 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC97Q96F63 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CCDC97Q96F63 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC97Q96F63 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC97Q96F63 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC97Q96F63 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC97Q96F63 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC97Q96F63 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC97Q96F63 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC97Q96F63 SNORA72.2-201ENST00000365028 127 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 Y_RNA.515-201ENST00000384535 112 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 MIR29B2-201ENST00000385055 81 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 SNORA12-201ENST00000391162 147 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 AL603910.2-201ENST00000407268 136 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 RAB28P5-201ENST00000427490 651 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 AC140059.1-201ENST00000489238 361 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 SERF1AP1-201ENST00000514575 187 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 RPL7P50-201ENST00000600588 727 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 ARF4P1-201ENST00000605447 541 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC97Q96F63 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.4□□□□□ -1.71
CCDC97Q96F63 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC97Q96F63 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC97Q96F63 FAM35DP-201ENST00000323387 2712 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC97Q96F63 AP003122.5-201ENST00000527668 3766 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC97Q96F63 Y_RNA.54-201ENST00000362766 105 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC97Q96F63 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 HMGN2P8-201ENST00000391458 268 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 AC004866.1-201ENST00000411748 78 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 ELOCP21-201ENST00000412558 336 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 RPS29P12-201ENST00000460178 152 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 RN7SL330P-201ENST00000469709 307 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 RPS26P28-201ENST00000470806 348 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 RN7SL604P-201ENST00000492589 296 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 HMGB3P17-201ENST00000504195 649 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 RNU6-111P-201ENST00000517179 105 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 AC106785.1-201ENST00000565935 262 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 SNORD11B-201ENST00000607707 90 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
CCDC97Q96F63 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CCDC97Q96F63 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 Y_RNA.331-201ENST00000365267 102 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 Y_RNA.415-201ENST00000384012 112 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 RNU6-1026P-201ENST00000384465 108 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 AC009237.7-201ENST00000447357 229 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 RPL27AP5-201ENST00000469428 449 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 RNU6-344P-201ENST00000516635 111 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC97Q96F63 AC037487.3-201ENST00000606668 112 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC97Q96F63 AC140113.4-201ENST00000622087 222 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 IGHVIII-44-202ENST00000636235 289 ntBASIC4.38□□□□□ -1.71
CCDC97Q96F63 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC97Q96F63 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CCDC97Q96F63 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC97Q96F63 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC97Q96F63 MIR423-201ENST00000362201 94 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 RNU6-1266P-201ENST00000362794 105 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 AL359837.1-201ENST00000381357 287 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 SNORA37-201ENST00000384504 129 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 MIR513A2-201ENST00000385249 127 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 MIR134-201ENST00000385258 73 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC97Q96F63 RPL23AP36-201ENST00000413895 458 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC97Q96F63 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 Z98949.2-201ENST00000440996 144 ntBASIC4.37□□□□□ -1.71
CCDC97Q96F63 AC146507.2-201ENST00000460608 476 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms