Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.07
CKAP2Q8WWK9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNU6-1285P-201ENST00000363480 105 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNU6-944P-201ENST00000364023 107 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL445529.1-201ENST00000398713 389 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL590002.1-201ENST00000406554 418 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNU2-32P-201ENST00000411193 191 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 EDDM3CP-201ENST00000415977 425 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 SEPT14P3-201ENST00000439401 183 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL732372.2-207ENST00000445840 183 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 SEPT14P2-201ENST00000453405 183 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 Y_RNA.654-201ENST00000497848 106 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 SEPT14P4-201ENST00000513445 186 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 RNU6-323P-201ENST00000521915 107 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 FO082796.1-201ENST00000523795 183 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC115990.1-201ENST00000526957 301 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AL357078.3-201ENST00000607528 618 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC087241.4-201ENST00000612441 480 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 AC103705.1-201ENST00000619013 241 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 CTSLP2-204ENST00000629029 392 ntBASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CKAP2Q8WWK9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 MIR29B2-201ENST00000385055 81 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 RPS15AP10-201ENST00000432472 382 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC091885.1-201ENST00000506658 268 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 RNU6-965P-201ENST00000516721 96 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 RNU6-667P-201ENST00000517186 102 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC034114.1-201ENST00000520293 285 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AP000763.2-201ENST00000540641 163 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC025423.5-201ENST00000550230 219 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 AL162413.1-201ENST00000603198 110 ntBASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CKAP2Q8WWK9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RNU6-1141P-201ENST00000364520 107 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RNU6-546P-201ENST00000383991 107 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AL590556.1-201ENST00000423231 483 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 SNAP23P1-201ENST00000433229 246 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RNU6-1208P-201ENST00000459588 107 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 HMGB1P35-201ENST00000503360 598 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 SNORA19.2-201ENST00000516013 114 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RNU6-1069P-201ENST00000516612 133 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 SNORD60.2-201ENST00000516883 86 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RN7SKP256-201ENST00000517201 314 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 MIR4529-201ENST00000578110 78 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 AC009314.1-201ENST00000603871 304 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 SNORD98-201ENST00000636377 67 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 OR4G1P-203ENST00000641984 1631 ntBASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CKAP2Q8WWK9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 Y_RNA.231-201ENST00000364358 102 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 ARL5AP1-201ENST00000418991 388 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 USP9YP18-201ENST00000425912 695 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AC244670.1-201ENST00000436879 112 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 RPL39P5-202ENST00000512505 151 ntBASIC2.11□□□□□ -2.07
CKAP2Q8WWK9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms