Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 AC024581.2-201ENST00000619986 252 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 MIR7515-201ENST00000637837 67 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
SLC44A1Q8WWI5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SNORD56.1-201ENST00000362913 68 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 FABP5P14-201ENST00000437273 393 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RPS15AP7-201ENST00000439294 405 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 DAP3P1-201ENST00000441522 278 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC243964.1-201ENST00000441814 261 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AP001324.2-201ENST00000461163 319 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 MTND3P22-201ENST00000510932 243 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RPL23AP94-201ENST00000512518 302 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SNORA31.6-201ENST00000516241 130 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RNU6-277P-201ENST00000516272 106 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RPS3AP23-202ENST00000574601 686 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 POLR3GP2-201ENST00000588366 668 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 RPS15AP11-201ENST00000594193 385 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL356157.2-201ENST00000605122 111 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AC096772.1-201ENST00000609146 564 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 AL161423.1-201ENST00000613700 262 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
SLC44A1Q8WWI5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SLC44A1Q8WWI5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 MTND5P30-201ENST00000452896 1731 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1245P-201ENST00000411130 106 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RPL37P10-201ENST00000412884 288 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RPS3AP52-201ENST00000435639 297 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 Y_RNA.635-201ENST00000459041 101 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RPL9P9-202ENST00000466501 579 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC018437.1-201ENST00000492214 406 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC114801.2-201ENST00000503825 781 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 PTP4A1P4-201ENST00000512479 322 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC109329.1-201ENST00000518744 317 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 RAB11AP2-201ENST00000545905 639 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AP001836.1-201ENST00000604675 523 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC113139.1-201ENST00000605049 239 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC124303.1-201ENST00000605703 360 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC241585.2-209ENST00000638217 143 ntBASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A1Q8WWI5 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC002543.1-201ENST00000299783 1954 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC135776.4-201ENST00000624300 1904 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 Y_RNA.482-201ENST00000384377 111 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-933P-201ENST00000384424 107 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 Y_RNA.529-201ENST00000384586 119 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 MIR517A-201ENST00000385001 87 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 CYCSP48-201ENST00000417124 323 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 MICF-203ENST00000432679 129 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RPS29P27-201ENST00000463711 170 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms