Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-451P-201ENST00000362921 107 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RNY3P3-201ENST00000363816 102 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-827P-201ENST00000365553 106 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.453-201ENST00000384223 109 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 MIR514A2-201ENST00000385131 88 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 MIR514A3-201ENST00000385132 88 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 SNORD73A-201ENST00000386062 65 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 FCF1P9-201ENST00000412546 282 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 ERLEC1P1-201ENST00000433806 578 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC009238.1-201ENST00000442165 424 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC009237.6-201ENST00000446969 424 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 CYP2C59P-201ENST00000457790 269 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 SNORA59A-201ENST00000459326 152 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-1208P-201ENST00000459588 107 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC083904.1-201ENST00000487828 231 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RPL38P4-201ENST00000502376 214 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-323P-201ENST00000521915 107 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 EIF4BP1-201ENST00000554881 351 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC103996.1-201ENST00000555468 102 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC080078.2-201ENST00000603766 501 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC009314.1-201ENST00000603871 304 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC107304.1-201ENST00000604229 296 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AL357078.3-201ENST00000607528 618 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC046143.2-201ENST00000609789 160 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC090517.2-201ENST00000614966 680 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 AC103705.1-201ENST00000619013 241 ntBASIC1.8□□□□□ -2.12
CCDC71LQ8N9Z2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP68-201ENST00000363885 119 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.295-201ENST00000364918 102 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 MIR544A-201ENST00000384855 91 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.615-201ENST00000410769 117 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.619-201ENST00000410951 90 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP184-201ENST00000411071 108 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-293P-201ENST00000411259 106 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 ARL5AP1-201ENST00000418991 388 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 MTND1P4-201ENST00000435196 415 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 UBE2V1P8-201ENST00000437166 265 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RPL23AP7-203ENST00000449021 469 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RNU7-138P-201ENST00000459479 64 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 SNRPGP7-201ENST00000469016 106 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 RN7SL636P-201ENST00000497504 294 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AK3P2-201ENST00000507976 429 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 SNORA19.2-201ENST00000516013 114 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC109479.2-201ENST00000517842 174 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC025423.5-201ENST00000550230 219 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 AC024614.3-201ENST00000637860 256 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 HAUS6P2-201ENST00000433254 2404 ntBASIC1.79□□□□□ -2.12
CCDC71LQ8N9Z2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-655P-201ENST00000362858 107 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.89-201ENST00000363031 102 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-105P-201ENST00000363909 104 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-336P-201ENST00000364891 107 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP240-201ENST00000365355 128 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-487P-201ENST00000365430 104 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-877P-201ENST00000383868 107 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.500-201ENST00000384466 111 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 Y_RNA.510-201ENST00000384511 114 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 MIR221-201ENST00000385135 110 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-332P-201ENST00000391193 108 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU4-26P-201ENST00000410270 107 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU2-23P-201ENST00000410545 195 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-1245P-201ENST00000411130 106 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL030996.1-201ENST00000411430 235 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 USP9YP18-201ENST00000425912 695 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC018634.1-201ENST00000437554 401 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 RPL39P29-201ENST00000447779 157 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AL121594.1-201ENST00000475906 575 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC107032.1-201ENST00000485945 480 ntBASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71LQ8N9Z2 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms