Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 MIR329-1-201ENST00000385028 80 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 RNA5SP390-201ENST00000410191 113 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AC104332.1-201ENST00000440471 797 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 Y_RNA.644-201ENST00000459006 113 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AC117440.1-201ENST00000474107 571 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 RN7SL271P-201ENST00000487601 295 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 RN7SL691P-201ENST00000494487 301 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 PHBP14-201ENST00000512887 367 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 Y_RNA.674-201ENST00000516362 113 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 RNU6-567P-201ENST00000516746 107 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 MIR4423-201ENST00000580922 80 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AC090897.2-201ENST00000581715 130 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 MIR5684-201ENST00000585074 65 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 ZYXP1-201ENST00000617638 118 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 AF127577.6-201ENST00000623352 2191 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 RBBP8P1-201ENST00000449447 1844 ntBASIC3.4□□□□□ -1.87
DTX3Q8N9I9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DTX3Q8N9I9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNU6-626P-201ENST00000363354 107 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNU6-487P-201ENST00000365430 104 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNU6-20P-201ENST00000384106 107 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 MIR1193-201ENST00000408109 78 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RPL23AP82-202ENST00000427528 469 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 HMGN2P15-201ENST00000585707 270 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AL512605.2-201ENST00000592972 256 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
DTX3Q8N9I9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX3Q8N9I9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC126755.2-208ENST00000327792 462 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC138969.1-213ENST00000331436 462 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 SNORA25.1-201ENST00000362326 128 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 RNU6-514P-201ENST00000384208 107 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AL390729.2-201ENST00000416137 156 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC012306.1-201ENST00000423267 114 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC002075.2-201ENST00000425207 252 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AL161651.1-201ENST00000440882 223 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AP000705.1-201ENST00000454567 350 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 RNA5SP246-201ENST00000458909 119 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 snoU13.28-201ENST00000459235 104 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 SNORA40.9-201ENST00000515895 93 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 RNA5SP54-201ENST00000516951 92 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC008011.1-201ENST00000545989 227 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC025884.1-201ENST00000556034 378 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC090877.1-201ENST00000561418 344 ntBASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX3Q8N9I9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DTX3Q8N9I9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DTX3Q8N9I9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.37□□□□□ -1.87
DTX3Q8N9I9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DTX3Q8N9I9 AC004944.1-201ENST00000517807 3059 ntBASIC3.37□□□□□ -1.87
DTX3Q8N9I9 MIR411-201ENST00000362239 96 ntBASIC3.37□□□□□ -1.87
DTX3Q8N9I9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.37□□□□□ -1.87
DTX3Q8N9I9 RNU6-873P-201ENST00000363833 107 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms