Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNA5SP295-201ENST00000362655 121 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 SNORA7.2-201ENST00000364446 145 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-336P-201ENST00000364891 107 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 SNORA69.1-201ENST00000390904 137 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-700P-201ENST00000391043 107 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 MIR1302-6-201ENST00000408466 90 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 MTCO3P19-201ENST00000415864 321 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 MTND3P9-201ENST00000429526 346 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 Z82210.1-201ENST00000440037 231 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 LINC01399-202ENST00000458450 244 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RPS4XP13-201ENST00000483219 789 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-1023P-201ENST00000516137 106 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 MIR3128-201ENST00000581957 66 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 AC008962.1-201ENST00000605729 304 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.552-201ENST00000384665 112 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 RPL21P38-201ENST00000418090 167 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AC007560.1-201ENST00000426912 237 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 MTCO3P29-201ENST00000432119 779 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AK3P2-201ENST00000507976 429 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 MIR3945-201ENST00000581853 98 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 AC008568.2-201ENST00000623862 2313 ntBASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SLC44A3Q8N4M1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 Z98749.2-208ENST00000381646 500 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-72P-201ENST00000384285 79 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.471-201ENST00000384312 102 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 MIR34A-201ENST00000385130 110 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 RNA5SP229-201ENST00000410809 99 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 RNU2-68P-201ENST00000410878 191 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC092047.1-201ENST00000424997 240 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC022018.1-201ENST00000430685 241 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 SNRPEP9-201ENST00000436794 238 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC067942.3-201ENST00000512025 362 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC091826.1-201ENST00000514065 313 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 SNORA40.15-201ENST00000516884 107 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-703P-201ENST00000516946 107 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC107934.2-201ENST00000518653 310 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AP003733.2-201ENST00000529409 171 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AL590705.4-201ENST00000532209 134 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC007375.1-201ENST00000554513 578 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 CYCSP39-201ENST00000565821 309 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC096772.1-201ENST00000609146 564 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC013412.1-201ENST00000610687 192 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 AC141273.2-201ENST00000618989 130 ntBASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC44A3Q8N4M1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-227P-201ENST00000362865 103 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 RNU1-76P-201ENST00000362903 159 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.183-201ENST00000363882 113 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 MIR628-201ENST00000385229 95 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 SNORA12.2-201ENST00000391040 156 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 MTCYBP2-201ENST00000407745 171 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AL590664.1-201ENST00000448065 339 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms