Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AP002884.2-201ENST00000471647 395 ntBASIC4.4□□□□□ -1.71
SIX5Q8N196 AL592156.1-201ENST00000508758 304 ntBASIC4.4□□□□□ -1.71
SIX5Q8N196 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.4□□□□□ -1.71
SIX5Q8N196 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIX5Q8N196 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.4□□□□□ -1.71
SIX5Q8N196 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.4□□□□□ -1.71
SIX5Q8N196 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.4□□□□□ -1.71
SIX5Q8N196 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIX5Q8N196 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SIX5Q8N196 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
SIX5Q8N196 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SIX5Q8N196 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SIX5Q8N196 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX5Q8N196 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX5Q8N196 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SIX5Q8N196 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX5Q8N196 DHX9P1-201ENST00000436565 3076 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX5Q8N196 SNORD113-1-201ENST00000365321 69 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 MIR483-201ENST00000385070 76 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 RNU2-49P-201ENST00000410666 184 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 AC009963.1-201ENST00000417265 157 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX5Q8N196 HMGB3P3-201ENST00000510526 400 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX5Q8N196 AP000867.2-201ENST00000532468 320 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 AC009127.3-201ENST00000570531 403 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 AC011471.1-201ENST00000585766 187 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 AC108706.1-201ENST00000611053 297 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.39□□□□□ -1.71
SIX5Q8N196 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX5Q8N196 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX5Q8N196 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX5Q8N196 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
SIX5Q8N196 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
SIX5Q8N196 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX5Q8N196 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX5Q8N196 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
SIX5Q8N196 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX5Q8N196 SNORD50.2-201ENST00000365465 70 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 RNU6-1264P-201ENST00000383891 107 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 AC096649.2-201ENST00000416186 393 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 CKS1BP6-201ENST00000424932 240 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 RPL35AP15-201ENST00000468042 339 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX5Q8N196 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX5Q8N196 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX5Q8N196 AC084757.4-201ENST00000616350 526 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX5Q8N196 MTND1P7-201ENST00000632801 297 ntBASIC4.38□□□□□ -1.71
SIX5Q8N196 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX5Q8N196 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX5Q8N196 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX5Q8N196 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
SIX5Q8N196 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SIX5Q8N196 RNA5SP124-201ENST00000362739 110 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 RNU6-1010P-201ENST00000362757 107 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 RNU6-653P-201ENST00000363074 106 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 Y_RNA.415-201ENST00000384012 112 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 RNU6-198P-201ENST00000384258 104 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 Y_RNA.571-201ENST00000384753 98 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 RNU6-1135P-201ENST00000411083 103 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 RNU6-1199P-201ENST00000411249 104 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 AC023141.4-201ENST00000412031 328 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX5Q8N196 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX5Q8N196 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.37□□□□□ -1.71
SIX5Q8N196 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX5Q8N196 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 SNORA51-201ENST00000606420 132 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 SNORD11B-201ENST00000607707 90 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 AC012314.7-201ENST00000619693 93 ntBASIC4.37□□□□□ -1.71
SIX5Q8N196 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX5Q8N196 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX5Q8N196 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX5Q8N196 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX5Q8N196 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SIX5Q8N196 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SIX5Q8N196 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX5Q8N196 Y_RNA.329-201ENST00000365209 107 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX5Q8N196 AL008718.3-201ENST00000610217 321 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 AC005562.2-201ENST00000618264 111 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 MIR6500-201ENST00000622700 86 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 AC018692.3-201ENST00000623929 123 ntBASIC4.36□□□□□ -1.71
SIX5Q8N196 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX5Q8N196 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX5Q8N196 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX5Q8N196 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX5Q8N196 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX5Q8N196 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX5Q8N196 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX5Q8N196 AP001486.2-201ENST00000561652 5113 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 Y_RNA.7-201ENST00000362352 102 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 Y_RNA.272-201ENST00000364696 102 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 SNORA73.2-201ENST00000364946 201 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 RNU4-17P-201ENST00000365598 141 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms