Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU2-44P-201ENST00000516795 194 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AL110118.1-201ENST00000553543 400 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 snoZ196.1-201ENST00000625269 89 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AL513302.2-201ENST00000562313 1842 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 MIR450A1-201ENST00000362262 91 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 RNU6-1164P-201ENST00000364428 107 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 SNORD58C-201ENST00000365223 64 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 SNORA67.2-201ENST00000384300 149 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 Z98745.1-201ENST00000402553 494 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AL161651.1-201ENST00000440882 223 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 SRIP1-201ENST00000489235 288 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AC209154.1-201ENST00000582156 337 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 FAM25E-202ENST00000608562 189 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AL591926.4-201ENST00000616895 298 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AL121890.5-201ENST00000620848 304 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 AC039056.2-201ENST00000622261 511 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 MIR3199-2-201ENST00000636243 86 ntBASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC116Q8IYX3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 RNU4-15P-201ENST00000362613 141 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.40-201ENST00000362645 93 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 RNA5SP167-201ENST00000365461 116 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 MIR518C-201ENST00000384822 101 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AL133475.1-201ENST00000404414 305 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 HMGN2P20-201ENST00000437531 273 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC006466.1-201ENST00000438721 289 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC107626.1-201ENST00000471084 183 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 RPS29P24-201ENST00000486345 171 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC105129.1-201ENST00000560250 297 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC004832.5-201ENST00000608677 401 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AC091953.3-201ENST00000623220 236 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 U3.53-201ENST00000628922 216 ntBASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC116Q8IYX3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.34□□□□□ -1.72
CCDC116Q8IYX3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC116Q8IYX3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC116Q8IYX3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC116Q8IYX3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC116Q8IYX3 AC007656.2-201ENST00000624902 4547 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AC011266.1-201ENST00000624119 3569 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AC004944.1-201ENST00000517807 3059 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RNU6-600P-201ENST00000362524 99 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RNU6-529P-201ENST00000363383 104 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 SNORA1.3-201ENST00000384676 136 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 MIR548B-201ENST00000385247 97 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RNY4P30-201ENST00000410216 95 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 Z74021.1-201ENST00000423610 407 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AL031737.1-201ENST00000450125 223 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AP000873.1-201ENST00000463987 400 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RNU6-197P-201ENST00000516680 100 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RNU6-537P-201ENST00000517277 103 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 MIR4480-201ENST00000582492 71 ntBASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC116Q8IYX3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms