Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
NPAS3Q8IXF0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 CYCSP19-201ENST00000411715 316 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC090515.1-201ENST00000465295 476 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 RNA5SP446-201ENST00000515955 82 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 RNU6-197P-201ENST00000516680 100 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 RNA5SP73-201ENST00000516744 108 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AL160290.3-201ENST00000604869 165 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AL359198.2-201ENST00000611836 194 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS3Q8IXF0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AL133383.2-201ENST00000622958 2336 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 Y_RNA.49-201ENST00000362714 112 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 RNU6-799P-201ENST00000363567 107 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 RNU6-1264P-201ENST00000383891 107 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 MIR1250-201ENST00000408098 113 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AC098614.2-201ENST00000426040 255 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 RPL31P41-201ENST00000477967 372 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AC007546.2-201ENST00000623996 360 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS3Q8IXF0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 SNORA62.3-201ENST00000365110 153 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 Y_RNA.342-201ENST00000365352 113 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 MIR570-201ENST00000384917 97 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RNA5SP31-201ENST00000411144 127 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 HMGB1P37-201ENST00000439613 609 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RPS29P7-201ENST00000439662 171 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RPL39P40-201ENST00000445481 146 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 AL021397.1-201ENST00000451806 248 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 AP004607.1-201ENST00000524456 203 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 AC141557.1-201ENST00000540982 400 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 AC021231.3-201ENST00000558497 370 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RNU6-94P-201ENST00000607728 107 ntBASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NPAS3Q8IXF0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AL589743.1-201ENST00000551932 2712 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 Y_RNA.73-201ENST00000362910 113 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 RNU1-20P-201ENST00000363314 162 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 RNY1P1-201ENST00000364372 112 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 Y_RNA.323-201ENST00000365157 109 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 MIR670-201ENST00000390142 98 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 SNORA36B-201ENST00000410438 131 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AC126124.2-201ENST00000413542 321 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AC079780.1-201ENST00000428259 207 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 CALM2P4-201ENST00000430810 426 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AC006026.2-201ENST00000457376 180 ntBASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.42□□□□□ -1.7
NPAS3Q8IXF0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms