Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR1283-2-201ENST00000408621 87 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 CYCSP33-201ENST00000414485 327 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC007098.1-201ENST00000420122 367 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC244505.5-201ENST00000443639 207 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RPS29P15-201ENST00000458329 171 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU7-182P-201ENST00000459009 62 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RPL30P12-201ENST00000474666 353 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC104136.1-201ENST00000512969 394 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU6-1178P-201ENST00000516674 107 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNA5SP503-201ENST00000517047 117 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RN7SKP256-201ENST00000517201 314 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AC006566.1-201ENST00000608943 513 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 AL359314.1-201ENST00000616913 261 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 RNU6-1029P-201ENST00000384109 107 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 SNORD14D-201ENST00000384390 87 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 RNU6-456P-201ENST00000384493 107 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 RNU2-32P-201ENST00000411193 191 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC108667.1-201ENST00000428618 249 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC133104.1-201ENST00000429100 218 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AL596276.1-201ENST00000434465 418 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AL031667.1-201ENST00000440222 725 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC079448.1-201ENST00000449377 373 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 snoU13.14-201ENST00000459372 104 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 AC007792.1-201ENST00000623023 402 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
CDKL3Q8IVW4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 SNORD115-3-201ENST00000363100 82 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RNU6-181P-201ENST00000363225 107 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RNU6-527P-201ENST00000363425 104 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RNU6-1303P-201ENST00000364841 107 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RNU6-546P-201ENST00000383991 107 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 CBX3P9-201ENST00000402326 552 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RN7SKP51-201ENST00000410781 304 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 BTF3L4P1-201ENST00000413813 468 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 PIGFP2-201ENST00000421400 651 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AL669831.1-202ENST00000428504 417 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 GTF2IP13-201ENST00000438487 386 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 MTND1P27-201ENST00000451117 902 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RPS27AP8-201ENST00000452665 445 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RN7SKP210-201ENST00000459176 261 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 RNU6-445P-201ENST00000516949 107 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AP003392.2-201ENST00000527269 208 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 MIR3913-1-201ENST00000577744 102 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC008945.2-201ENST00000606056 604 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 Z82243.1-201ENST00000609432 473 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC099842.1-201ENST00000619919 596 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 AC097372.5-201ENST00000623665 376 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 Z69720.2-201ENST00000624755 279 ntBASIC1.5□□□□□ -2.17
CDKL3Q8IVW4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RNU6-944P-201ENST00000364023 107 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RNU4-48P-201ENST00000365559 182 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 AC068050.1-201ENST00000394891 380 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RNU4-46P-201ENST00000410818 138 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 RN7SKP142-201ENST00000411236 328 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 SRIP3-201ENST00000413200 219 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 MTCO2P34-201ENST00000421994 607 ntBASIC1.49□□□□□ -2.17
CDKL3Q8IVW4 USP9YP18-201ENST00000425912 695 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms