Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MTCO1P29-201ENST00000496868 288 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC046134.1-201ENST00000514454 666 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 SNORA25.11-201ENST00000515935 105 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 RNU6-864P-201ENST00000516256 108 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 RNU6-875P-201ENST00000516488 106 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 Y_RNA.702-201ENST00000516843 96 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC087241.2-201ENST00000535801 324 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC105245.1-201ENST00000581934 244 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 ELOCP5-201ENST00000604924 333 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC005046.1-201ENST00000608515 625 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC107871.2-201ENST00000612894 502 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 FAM157A-202ENST00000615155 405 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC009248.2-201ENST00000619826 254 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
HERC6Q8IVU3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
HERC6Q8IVU3 CBX3P1-201ENST00000325243 554 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RNA5SP289-201ENST00000362332 137 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RNU6-212P-201ENST00000362642 104 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.87□□□□□ -1.95
HERC6Q8IVU3 AL139396.1-201ENST00000421137 167 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 AC098614.3-201ENST00000438957 440 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 AC243964.1-201ENST00000441814 261 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.87□□□□□ -1.95
HERC6Q8IVU3 GSTA11P-201ENST00000452866 669 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RNU7-66P-201ENST00000459469 62 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RPL9P9-202ENST00000466501 579 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.87□□□□□ -1.95
HERC6Q8IVU3 MTCO3P13-201ENST00000577757 781 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 LARP7P1-201ENST00000605576 316 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 AC064836.2-201ENST00000609491 462 ntBASIC2.87□□□□□ -1.95
HERC6Q8IVU3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU6-529P-201ENST00000363383 104 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 Y_RNA.212-201ENST00000364177 102 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU6-767P-201ENST00000384132 107 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU6-831P-201ENST00000384548 107 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RPL30P4-201ENST00000429309 333 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC003982.1-202ENST00000469928 248 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNU4-49P-201ENST00000516080 140 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNA5SP282-201ENST00000516355 108 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC107953.1-201ENST00000522216 297 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC243972.3-201ENST00000539655 198 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC005668.1-201ENST00000571142 476 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 MIR3672-201ENST00000584290 82 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 UBE2V2P2-201ENST00000587677 504 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC023043.2-201ENST00000589678 1026 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AL359198.2-201ENST00000611836 194 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AL138726.1-201ENST00000614873 333 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 AC241585.2-209ENST00000638217 143 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HERC6Q8IVU3 MTND4P23-201ENST00000447723 1363 ntBASIC2.86□□□□□ -1.95
HERC6Q8IVU3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 SNORD62.1-201ENST00000362541 86 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 RNU6-845P-201ENST00000362578 103 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 RNU6-655P-201ENST00000362858 107 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 SNORD116-11-201ENST00000383882 92 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 CYCSP48-201ENST00000417124 323 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 PDCL2P1-201ENST00000419302 352 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AC073901.1-201ENST00000462471 408 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 RNU2-53P-201ENST00000516257 147 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 IGKV3-31-201ENST00000523109 329 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 SCOCP1-201ENST00000554676 349 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 AL670379.2-201ENST00000604983 252 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HERC6Q8IVU3 MTND4P12-201ENST00000498999 1377 ntBASIC2.85□□□□□ -1.95
HERC6Q8IVU3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms