Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AL445305.1-201ENST00000432577 575 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 BX679664.1-201ENST00000434429 253 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RPS15AP7-201ENST00000439294 405 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AP000870.1-201ENST00000472927 406 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RPS27P26-201ENST00000494583 239 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AC093663.1-201ENST00000497190 394 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AC110768.1-201ENST00000509222 400 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RNA5SP164-201ENST00000516533 110 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 CYP4A27P-201ENST00000567218 190 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNU6-799P-201ENST00000363567 107 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 SNORD115-8-201ENST00000363856 82 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 SNORD115-38-201ENST00000365037 82 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNU6-1027P-201ENST00000383998 107 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC017079.2-201ENST00000416102 485 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 snoU13.14-201ENST00000459372 104 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RPL36AP48-201ENST00000485521 314 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNU6-861P-201ENST00000516745 106 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 MIR3923-201ENST00000579521 83 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AL162713.1-201ENST00000604480 262 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNU1-30P-201ENST00000606575 163 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 U3.45-201ENST00000607547 219 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC011476.5-201ENST00000615594 130 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 U2.14-201ENST00000615943 113 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AC240442.1-201ENST00000616055 283 ntBASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPAS4Q8IUM7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AL353746.1-201ENST00000566293 6881 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 SNORA36A-201ENST00000384221 132 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 U8.10-201ENST00000384260 133 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 HDGFP1-201ENST00000405943 252 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 NDUFB4P10-201ENST00000452541 359 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 RPL7P47-201ENST00000497299 556 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 RNU6-496P-201ENST00000516145 99 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 IGLV3-26-201ENST00000520756 302 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC027288.2-201ENST00000553028 243 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AL034555.1-201ENST00000604816 211 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 BRDTP1-201ENST00000605735 677 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC005296.1-201ENST00000616145 209 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 AC021753.1-201ENST00000635724 168 ntBASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
NPAS4Q8IUM7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 AL359854.1-201ENST00000614203 1594 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 RNU6-1301P-201ENST00000362724 104 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 RNU6-1083P-201ENST00000384022 107 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 RNU1-57P-201ENST00000384491 166 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 MIR183-201ENST00000384958 110 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 U3.26-201ENST00000391236 204 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 TMSB4XP3-201ENST00000445144 114 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 snoU13.6-201ENST00000458785 104 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 AC106707.2-201ENST00000484182 374 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 RN7SKP18-201ENST00000516005 275 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 SNORA31.16-201ENST00000516773 139 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 AC022559.1-201ENST00000520905 205 ntBASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.16□□□□□ -1.74
NPAS4Q8IUM7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms