Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AL358075.3-201ENST00000426289 226 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AC093151.1-201ENST00000427711 313 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AL031274.1-201ENST00000450334 232 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 PCMTD1P1-201ENST00000455560 355 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 Y_RNA.632-201ENST00000459189 102 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 SRIP1-201ENST00000489235 288 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 SCARNA15.1-201ENST00000516384 125 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 ACA59.2-201ENST00000517061 156 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AC109329.1-201ENST00000518744 317 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 AC005899.2-201ENST00000584353 90 ntBASIC3.33□□□□□ -1.88
COL23A1Q86Y22 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
COL23A1Q86Y22 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 MIR1302-11-201ENST00000408051 138 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 MIR1302-9-201ENST00000408365 138 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 MIR1302-10-201ENST00000408734 138 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AL354751.2-201ENST00000415471 210 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC074117.2-201ENST00000417130 397 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AL353705.4-201ENST00000449661 238 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC104472.2-201ENST00000469035 601 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 RPL23AP49-201ENST00000492925 468 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AK3P2-201ENST00000507976 429 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 TRAV32-201ENST00000553993 340 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 MIR1302-2-201ENST00000607096 138 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 AC138627.2-201ENST00000624202 601 ntBASIC3.32□□□□□ -1.88
COL23A1Q86Y22 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL23A1Q86Y22 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 SNORA63-201ENST00000363450 132 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 SNORA51.4-201ENST00000364993 124 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 RNU6-827P-201ENST00000365553 106 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 RNU6-601P-201ENST00000384540 107 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 MIR27B-201ENST00000385129 97 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 RN7SKP58-201ENST00000411010 305 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 RNA5SP247-201ENST00000411181 105 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AP000275.1-201ENST00000411943 390 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 snoU109.2-201ENST00000459316 135 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 RPS27AP9-201ENST00000477681 438 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 ACA59.1-201ENST00000515966 143 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 Y_RNA.708-201ENST00000516950 96 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC078795.3-201ENST00000602913 472 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC019159.1-201ENST00000605094 187 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 AC019193.3-201ENST00000609144 554 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 MIR8076-201ENST00000611401 83 ntBASIC3.31□□□□□ -1.88
COL23A1Q86Y22 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL23A1Q86Y22 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RPL9P7-201ENST00000330965 580 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 MIR26A1-201ENST00000362205 77 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RNU6-527P-201ENST00000363425 104 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 SNORD73A-201ENST00000386062 65 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AL135786.1-201ENST00000415892 214 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 MTCO2P12-201ENST00000427426 682 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RNU7-152P-201ENST00000458982 64 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RPL9P9-202ENST00000466501 579 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
COL23A1Q86Y22 RPL23AP78-201ENST00000599928 470 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AC018462.2-201ENST00000605375 395 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 AC090115.4-201ENST00000609970 188 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 U4.3-201ENST00000621047 82 ntBASIC3.3□□□□□ -1.88
COL23A1Q86Y22 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms