Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RPL39P39-201ENST00000455840 151 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 AC104629.1-201ENST00000494226 508 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 AC090615.1-201ENST00000577519 154 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 AC064807.4-201ENST00000607201 407 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.52□□□□□ -2.49
LINC00643Q86TS7 RNU6-37P-201ENST00000362692 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-11P-201ENST00000364234 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-1-201ENST00000383898 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6V-201ENST00000384105 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-42P-201ENST00000384165 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-36P-201ENST00000384172 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-4P-201ENST00000384205 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-5P-201ENST00000384238 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-3P-201ENST00000384314 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-2-201ENST00000384627 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-9-201ENST00000384776 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-33P-201ENST00000384793 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-952P-201ENST00000391164 108 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 SEPT7P5-201ENST00000434048 306 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 SNRPEP8-201ENST00000442866 260 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AC003071.1-201ENST00000451219 789 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AP000797.1-201ENST00000478870 387 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AC108210.2-201ENST00000503681 201 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 MTCO1P31-201ENST00000506355 492 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 AC110760.3-202ENST00000515177 371 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 OR6C7P-201ENST00000547875 934 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 RNU6-6P-201ENST00000606623 107 ntBASIC-0.53□□□□□ -2.49
LINC00643Q86TS7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 SNORD41-201ENST00000386967 70 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 MIR764-201ENST00000390811 85 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 SNORD71-201ENST00000411292 86 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 MTCO1P21-201ENST00000416634 589 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 VPS26BP1-201ENST00000417155 755 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AC013828.1-201ENST00000481845 158 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AC098799.1-201ENST00000504752 800 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AK3P2-201ENST00000507976 429 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 SNORA25.12-201ENST00000516202 82 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 RNU6-885P-201ENST00000516607 104 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 RNU6-572P-201ENST00000516724 80 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 MIR151B-201ENST00000584249 96 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AC131055.1-201ENST00000584626 316 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 AL138955.1-201ENST00000622881 1040 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 MIR1295B-201ENST00000636144 60 ntBASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
LINC00643Q86TS7 RNU6-534P-201ENST00000364877 106 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 RNU6-622P-201ENST00000384272 103 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 RNU6-891P-201ENST00000384280 111 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 SNORD105-201ENST00000386910 85 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 MIR449C-201ENST00000516047 92 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC091163.3-201ENST00000518269 1144 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC027419.1-201ENST00000522976 328 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC023157.2-201ENST00000540596 141 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 AC112693.2-201ENST00000556538 232 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 MIR4742-201ENST00000581069 85 ntBASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.55□□□□□ -2.5
LINC00643Q86TS7 RNU6-754P-201ENST00000391166 107 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AL590084.2-201ENST00000401481 382 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 RNU6-564P-201ENST00000410983 104 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AC010095.1-201ENST00000443543 144 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 RPL7P55-201ENST00000450522 746 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 RNU6-889P-201ENST00000517189 103 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 MTND4LP26-201ENST00000518144 282 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AC007363.1-201ENST00000604736 620 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AC106754.2-201ENST00000623006 233 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 AL356094.1-201ENST00000624663 1212 ntBASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC-0.56□□□□□ -2.5
LINC00643Q86TS7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 RNA5SP247-201ENST00000411181 105 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 TPMTP2-201ENST00000414372 726 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 MTCO3P41-201ENST00000414801 328 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 MTCYBP10-201ENST00000424905 650 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AL162725.1-201ENST00000435405 301 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 MTATP6P30-201ENST00000443540 664 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AC016717.1-201ENST00000448918 286 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 MTCO3P10-201ENST00000455912 772 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 MTCO3P28-201ENST00000513351 515 ntBASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
LINC00643Q86TS7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms