Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.70-201ENST00000362886 110 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-593P-201ENST00000364716 112 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 MIR147B-201ENST00000390185 80 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-1106P-201ENST00000390845 107 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-325P-201ENST00000411132 105 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AP000275.1-201ENST00000411943 390 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 CYCSP48-201ENST00000417124 323 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RPS12P2-201ENST00000439728 269 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AL441985.1-201ENST00000457727 251 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AP001324.2-201ENST00000461163 319 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RPS29P27-201ENST00000463711 170 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RPL23AP49-201ENST00000492925 468 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AK3P2-201ENST00000507976 429 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-277P-201ENST00000516272 106 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP148-201ENST00000516527 94 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 SNORA31.18-201ENST00000517043 134 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC109329.1-201ENST00000518744 317 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC079598.5-201ENST00000547460 117 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC005668.1-201ENST00000571142 476 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 MIR4790-201ENST00000577799 79 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 MIR3162-201ENST00000581818 82 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 MIR4672-201ENST00000583126 81 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 RPS15AP11-201ENST00000594193 385 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AL117336.2-201ENST00000602435 335 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AL356157.2-201ENST00000605122 111 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AL132765.2-201ENST00000610812 351 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC098657.3-201ENST00000620434 263 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC244517.12-201ENST00000623581 663 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 AC010329.5-201ENST00000623497 2174 ntBASIC2.91□□□□□ -1.94
SYNE3Q6ZMZ3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.9□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-858P-201ENST00000362436 107 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC022028.1-201ENST00000412054 408 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 RPL23AP95-201ENST00000426806 265 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AL591043.1-201ENST00000432461 424 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 DAP3P1-201ENST00000441522 278 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 snoU13.14-201ENST00000459372 104 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AC010186.2-204ENST00000537668 439 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 POLR3GP2-201ENST00000588366 668 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AP001836.1-201ENST00000604675 523 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AL161423.1-201ENST00000613700 262 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 AL159153.1-201ENST00000619688 317 ntBASIC2.9□□□□□ -1.95
SYNE3Q6ZMZ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 SNORD32A-201ENST00000364805 84 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 MIR548F5-201ENST00000408421 86 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC074085.1-201ENST00000413598 418 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 FABP5P14-201ENST00000437273 393 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 FGF7P1-201ENST00000582820 288 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC006023.1-201ENST00000603944 259 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC024581.2-201ENST00000619986 252 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AC241585.2-209ENST00000638217 143 ntBASIC2.89□□□□□ -1.95
SYNE3Q6ZMZ3 AL359854.1-201ENST00000614203 1594 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AL136360.1-201ENST00000503377 1900 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 SNORD56.1-201ENST00000362913 68 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-527P-201ENST00000363425 104 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-596P-201ENST00000365395 98 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU2-23P-201ENST00000410545 195 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-293P-201ENST00000411259 106 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RPS3AP52-201ENST00000435639 297 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC107399.1-201ENST00000451226 265 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 U8.21-201ENST00000459536 136 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC116337.1-201ENST00000509680 687 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 RNU6-273P-201ENST00000516937 96 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC078795.3-201ENST00000602913 472 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC096772.1-201ENST00000609146 564 ntBASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNE3Q6ZMZ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms