Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC004584.2-201ENST00000570407 410 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RAC1P9-201ENST00000604990 392 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC004805.2-201ENST00000605382 482 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AP002826.1-201ENST00000608835 315 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC009318.2-201ENST00000610917 651 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 MIR8076-201ENST00000611401 83 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 HMGB1P24-202ENST00000615653 685 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 U2.1-201ENST00000618978 145 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC090617.7-201ENST00000623952 126 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 ZNF299P-201ENST00000406845 1804 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC007785.2-201ENST00000598627 1916 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 MAPK10-362ENST00000641864 4484 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC007256.1-201ENST00000392253 2765 ntBASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF549Q6P9A3 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC092593.1-201ENST00000515413 1815 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 RNU6-806P-201ENST00000365147 105 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 Z98749.2-208ENST00000381646 500 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 RNU6-933P-201ENST00000384424 107 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 MT-TW-201ENST00000387382 68 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 SNORD88.1-201ENST00000408684 91 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 CYCSP32-201ENST00000440548 321 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 OSTCP8-201ENST00000445117 448 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 FCF1P4-201ENST00000448326 183 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 SSXP4-201ENST00000451349 245 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 PCNPP5-201ENST00000452246 481 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC109329.1-201ENST00000518744 317 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AP005902.1-201ENST00000521358 186 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC023157.2-201ENST00000540596 141 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 H3F3AP1-201ENST00000559984 334 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC006600.1-201ENST00000572529 153 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 VN1R91P-201ENST00000594377 169 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC100812.1-201ENST00000607622 580 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC062037.2-201ENST00000610137 73 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AL442067.1-201ENST00000613261 223 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AL138825.1-201ENST00000618587 192 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 MTND5P9-201ENST00000503854 1755 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC118273.1-201ENST00000525324 3006 ntBASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
ZNF549Q6P9A3 AC233263.6-201ENST00000631132 1963 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC008568.2-201ENST00000623862 2313 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC000403.1-201ENST00000613696 3585 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 RPS29P13-201ENST00000402041 169 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC098614.2-201ENST00000426040 255 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AL139132.1-201ENST00000431587 344 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 Z82210.1-201ENST00000440037 231 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AL078601.1-201ENST00000444542 271 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC009237.8-201ENST00000445492 379 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 RNU7-169P-201ENST00000459456 61 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 RNU6-703P-201ENST00000516946 107 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 RNU7-4P-201ENST00000516961 62 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 AC125232.2-201ENST00000592457 143 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 U4.7-201ENST00000638126 106 ntBASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.81□□□□□ -1.96
ZNF549Q6P9A3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 AP000560.1-201ENST00000624150 1937 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 RNU6-336P-201ENST00000364891 107 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.8□□□□□ -1.96
ZNF549Q6P9A3 MIR521-1-201ENST00000384902 87 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms