Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC016700.2-201ENST00000446011 156 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 Z75741.1-201ENST00000446793 314 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC012308.1-201ENST00000451232 178 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AL138752.1-201ENST00000452964 351 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AP000870.1-201ENST00000472927 406 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-1114P-201ENST00000516022 107 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 MIR5004-201ENST00000579078 107 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC019159.1-201ENST00000605094 187 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 U2.21-201ENST00000637295 81 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PRPF40BQ6NWY9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.34□□□□□ -1.72
PRPF40BQ6NWY9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
PRPF40BQ6NWY9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 RNU4-90P-201ENST00000362773 141 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-942P-201ENST00000363002 107 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.200-201ENST00000364018 102 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 RNA5SP42-201ENST00000364278 115 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.269-201ENST00000364685 89 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-290P-201ENST00000365212 101 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 RNU2-14P-201ENST00000411053 191 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC098831.1-201ENST00000440661 216 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AL031659.1-201ENST00000447075 539 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC125238.1-201ENST00000448842 249 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 S100A11P2-201ENST00000467589 312 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AF186996.7-201ENST00000492781 209 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC091874.1-201ENST00000511402 339 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC037487.3-201ENST00000606668 112 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 U2.14-201ENST00000615943 113 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF40BQ6NWY9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AC010733.2-201ENST00000589496 5702 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 MIR423-201ENST00000362201 94 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 MIR3074-201ENST00000384885 81 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 SNORA53-201ENST00000391141 249 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 MIR888-201ENST00000401186 77 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 Z98941.1-201ENST00000407764 100 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AC017079.2-201ENST00000416102 485 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 SERF1AP1-201ENST00000514575 187 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AP006245.1-201ENST00000522549 120 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 LARP7P3-201ENST00000579888 337 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AC137590.2-201ENST00000619709 240 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AC006386.2-201ENST00000624491 75 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 AC012005.1-201ENST00000624575 75 ntBASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRPF40BQ6NWY9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.150-201ENST00000363562 102 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RNY1-201ENST00000364228 113 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RNU1-100P-201ENST00000365255 165 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.504-201ENST00000384481 104 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-102P-201ENST00000384485 104 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RNU1-139P-201ENST00000391307 165 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RN7SKP53-201ENST00000411337 315 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC084357.1-201ENST00000473404 255 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 MED28P2-201ENST00000475771 317 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-496P-201ENST00000516145 99 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AL512605.2-201ENST00000592972 256 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AL451007.1-201ENST00000595491 289 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC110741.2-201ENST00000605278 268 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC004792.1-201ENST00000614523 137 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 FTX_2.1-201ENST00000618816 94 ntBASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
PRPF40BQ6NWY9 AC058791.1-201ENST00000608412 3198 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 SNORA29-201ENST00000384183 140 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 RPS4XP3-201ENST00000398541 413 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MIR1298-201ENST00000408783 112 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms