Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC115990.1-201ENST00000526957 301 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AL117187.1-201ENST00000555482 181 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AC010928.2-201ENST00000588017 287 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RMST_6.1-201ENST00000611980 203 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AC091953.5-201ENST00000622919 233 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SSRP1Q08945 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
SSRP1Q08945 ZNF72P-201ENST00000425869 1908 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SSRP1Q08945 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.71□□□□□ -1.82
SSRP1Q08945 RNA5SP383-201ENST00000362934 120 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 RNU6-1309P-201ENST00000363305 108 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 Y_RNA.133-201ENST00000363428 110 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 SNORD56.3-201ENST00000363507 71 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 RNU6-1140P-201ENST00000410517 106 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 OR2AQ1P-201ENST00000451972 200 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AC087477.1-201ENST00000465747 340 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AF186996.7-201ENST00000492781 209 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AC093852.1-201ENST00000503587 266 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 RNA5SP217-201ENST00000515959 91 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.71□□□□□ -1.82
SSRP1Q08945 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.71□□□□□ -1.82
SSRP1Q08945 AC021231.3-201ENST00000558497 370 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 Z98751.3-201ENST00000604447 521 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AL359198.2-201ENST00000611836 194 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 uc_338.25-201ENST00000613756 156 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 AC243829.7-201ENST00000633081 225 ntBASIC3.71□□□□□ -1.82
SSRP1Q08945 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.71□□□□□ -1.82
SSRP1Q08945 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSRP1Q08945 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSRP1Q08945 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSRP1Q08945 RNU5B-2P-201ENST00000363036 113 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 RNA5SP267-201ENST00000364893 126 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 SNORA9-201ENST00000384215 133 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 Y_RNA.526-201ENST00000384572 110 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 SNORA26.3-201ENST00000391119 136 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 RNU1-101P-201ENST00000391171 127 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 MTCO3P19-201ENST00000415864 321 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 CYCSP48-201ENST00000417124 323 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 AC138623.1-201ENST00000418060 216 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.7□□□□□ -1.82
SSRP1Q08945 AC005326.1-201ENST00000429197 123 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 RPS3AP12-201ENST00000443616 753 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 Z75741.1-201ENST00000446793 314 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 TOMM22P6-201ENST00000465035 409 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.7□□□□□ -1.82
SSRP1Q08945 RPL22P13-201ENST00000493291 347 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
SSRP1Q08945 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.7□□□□□ -1.82
SSRP1Q08945 AC124312.5-201ENST00000604451 268 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 AC096577.2-201ENST00000611455 153 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 MIR8058-201ENST00000615737 89 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 AC137590.2-201ENST00000619709 240 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 AC092628.2-201ENST00000622492 339 ntBASIC3.7□□□□□ -1.82
SSRP1Q08945 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.7□□□□□ -1.82
SSRP1Q08945 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSRP1Q08945 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSRP1Q08945 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.7□□□□□ -1.82
SSRP1Q08945 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
SSRP1Q08945 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.69□□□□□ -1.82
SSRP1Q08945 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SSRP1Q08945 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU6-1010P-201ENST00000362757 107 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU6-799P-201ENST00000363567 107 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNA5SP72-201ENST00000364442 117 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU6-450P-201ENST00000364654 107 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 Y_RNA.380-201ENST00000365663 111 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU6-17P-201ENST00000384245 107 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU6-18P-201ENST00000384527 107 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNVU1-14-201ENST00000384770 164 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 MIR548F4-201ENST00000408515 105 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RPL32P35-201ENST00000415214 394 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.69□□□□□ -1.82
SSRP1Q08945 OSTCP8-201ENST00000445117 448 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 RNU7-87P-201ENST00000459343 62 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AP001324.2-201ENST00000461163 319 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.69□□□□□ -1.82
SSRP1Q08945 AC074250.1-201ENST00000511117 192 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AC040926.1-201ENST00000530195 238 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.69□□□□□ -1.82
SSRP1Q08945 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.69□□□□□ -1.82
SSRP1Q08945 MIR3186-201ENST00000577404 85 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.69□□□□□ -1.82
SSRP1Q08945 AL159153.1-201ENST00000619688 317 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 AL450472.1-202ENST00000637286 180 ntBASIC3.69□□□□□ -1.82
SSRP1Q08945 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSRP1Q08945 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.68□□□□□ -1.82
SSRP1Q08945 SNORD114-19-201ENST00000363072 75 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 Y_RNA.557-201ENST00000384680 107 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 MIR32-201ENST00000384965 70 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 MIR483-201ENST00000385070 76 ntBASIC3.68□□□□□ -1.82
SSRP1Q08945 MIR153-2-201ENST00000385225 87 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms