Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 AC104332.1-201ENST00000440471 797 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN12Q05209 snoU13.28-201ENST00000459235 104 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 RPS27AP10-201ENST00000496103 208 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AC026333.2-201ENST00000542164 106 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN12Q05209 MIR4513-201ENST00000581077 86 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AC012493.2-201ENST00000595083 291 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AL451007.1-201ENST00000595491 289 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AL137843.1-201ENST00000605078 385 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 U2.14-201ENST00000615943 113 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 MIR3199-2-201ENST00000636243 86 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 AL079305.1-201ENST00000623159 3008 ntBASIC4.32□□□□□ -1.72
PTPN12Q05209 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN12Q05209 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN12Q05209 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPN12Q05209 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
PTPN12Q05209 Y_RNA.180-201ENST00000363867 113 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 Y_RNA.199-201ENST00000364014 102 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 Y_RNA.504-201ENST00000384481 104 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPN12Q05209 SNORA53-201ENST00000391141 249 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 SNORA48.5-201ENST00000391143 135 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 SNORD12B-201ENST00000410433 91 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 AC006989.1-201ENST00000427212 131 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 AF186996.7-201ENST00000492781 209 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 AC037487.3-201ENST00000606668 112 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 AC005296.1-201ENST00000616145 209 ntBASIC4.31□□□□□ -1.72
PTPN12Q05209 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN12Q05209 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN12Q05209 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN12Q05209 AC068647.1-201ENST00000489539 2265 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN12Q05209 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN12Q05209 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN12Q05209 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPN12Q05209 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN12Q05209 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RNU1-35P-201ENST00000362782 153 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RNU6-942P-201ENST00000363002 107 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 SNORD115-32-201ENST00000364079 82 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RNU1-100P-201ENST00000365255 165 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 SNORA29-201ENST00000384183 140 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RNU6-318P-201ENST00000384283 103 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RN7SKP111-201ENST00000410349 271 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 AL139156.1-201ENST00000412785 841 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 EIF1P2-201ENST00000428233 350 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 Y_RNA.644-201ENST00000459006 113 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RPS29P20-201ENST00000489592 171 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 AC093663.1-201ENST00000497190 394 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 RNU6-1114P-201ENST00000516022 107 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 Y_RNA.674-201ENST00000516362 113 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN12Q05209 MIR4643-201ENST00000577473 78 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 MIR5695-201ENST00000579717 85 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN12Q05209 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN12Q05209 AC019159.1-201ENST00000605094 187 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN12Q05209 MIR7112-201ENST00000616126 65 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 U2.22-201ENST00000636441 106 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 MFSD8-233ENST00000641482 4860 ntBASIC4.3□□□□□ -1.72
PTPN12Q05209 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN12Q05209 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN12Q05209 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN12Q05209 RNA5SP361-201ENST00000362686 118 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 RNU6-774P-201ENST00000363238 107 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 Y_RNA.500-201ENST00000384466 111 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 RNU6-21P-201ENST00000384710 107 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 SNORD58.1-201ENST00000391313 66 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 RNU4-30P-201ENST00000410245 143 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN12Q05209 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN12Q05209 HSPE1P25-201ENST00000455484 251 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN12Q05209 RNU7-110P-201ENST00000516891 62 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 RNU6-789P-201ENST00000517105 102 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 AC024405.2-202ENST00000532731 184 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN12Q05209 AL391261.3-201ENST00000557194 520 ntBASIC4.29□□□□□ -1.72
PTPN12Q05209 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN12Q05209 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN12Q05209 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN12Q05209 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN12Q05209 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN12Q05209 AC110491.1-201ENST00000562191 2010 ntBASIC4.28□□□□□ -1.72
PTPN12Q05209 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN12Q05209 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN12Q05209 RNU6-270P-201ENST00000364131 105 ntBASIC4.28□□□□□ -1.72
PTPN12Q05209 MIR544A-201ENST00000384855 91 ntBASIC4.28□□□□□ -1.72
PTPN12Q05209 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms