Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS3AP1-201ENST00000413190 320 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC092634.6-201ENST00000418558 192 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.03□□□□□ -2.41
HSPG2P98160 SNORA40.12-201ENST00000516329 111 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 AC018630.3-201ENST00000542637 96 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL121579.1-201ENST00000555129 305 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC027104.1-201ENST00000563702 681 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC004853.1-201ENST00000604902 698 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL356157.2-201ENST00000605122 111 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL590396.4-201ENST00000636779 956 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 MIR4320-201ENST00000636981 65 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC112487.2-201ENST00000637950 304 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.03□□□□□ -2.42
HSPG2P98160 SNORD116-13-201ENST00000384408 92 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 RNA5SP219-201ENST00000390940 113 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AL121978.1-201ENST00000402778 359 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AL161935.2-201ENST00000414627 60 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 PDCL2P1-201ENST00000419302 352 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.03□□□□□ -2.42
HSPG2P98160 HMGN2P34-201ENST00000437647 269 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.03□□□□□ -2.42
HSPG2P98160 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.03□□□□□ -2.42
HSPG2P98160 SNORA68.3-201ENST00000515906 83 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.03□□□□□ -2.42
HSPG2P98160 AC005951.2-201ENST00000576282 495 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 MIR3169-201ENST00000578032 83 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AC060771.1-201ENST00000582031 164 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AC025627.3-201ENST00000582078 182 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 AL357094.1-201ENST00000603845 844 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 RAC1P9-201ENST00000604990 392 ntBASIC-0.03□□□□□ -2.42
HSPG2P98160 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU6-386P-201ENST00000362650 107 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU6-619P-201ENST00000365146 108 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.04□□□□□ -2.42
HSPG2P98160 HMGN1P12-201ENST00000499125 195 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC093534.1-201ENST00000504977 132 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.04□□□□□ -2.42
HSPG2P98160 SCARNA8-201ENST00000515924 131 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 IGJP1-201ENST00000522682 475 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC136618.2-201ENST00000575091 400 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AL590396.2-201ENST00000636511 1041 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 SNORA16.2-201ENST00000390991 127 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 MTCO2P8-201ENST00000412213 658 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AC104651.1-201ENST00000427559 735 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 TXNL1P1-201ENST00000429528 554 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 GPM6BP2-201ENST00000432046 144 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AL008629.1-201ENST00000438615 184 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 GPM6BP1-201ENST00000446387 144 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AL096829.2-201ENST00000446582 742 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 U7.7-201ENST00000459276 60 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 RPS3AP17-201ENST00000472594 777 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC048334.1-201ENST00000477975 159 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AC025423.5-201ENST00000550230 219 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 MIR5094-201ENST00000578766 85 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AL603758.1-201ENST00000618654 241 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC079416.3-201ENST00000624479 549 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU6-778P-201ENST00000363269 103 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU6-575P-201ENST00000411326 105 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.04□□□□□ -2.42
HSPG2P98160 RNU7-21P-201ENST00000459430 62 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC093259.1-201ENST00000509755 300 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 AC011406.1-201ENST00000512440 370 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.04□□□□□ -2.42
HSPG2P98160 AC012065.4-201ENST00000602445 679 ntBASIC-0.04□□□□□ -2.42
HSPG2P98160 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
HSPG2P98160 CALM2P3-201ENST00000400429 449 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC068533.2-201ENST00000411872 306 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MTND4P20-201ENST00000424125 869 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 C8orf59P1-201ENST00000429930 303 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AC011005.2-201ENST00000487324 359 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RNU2-12P-201ENST00000517216 168 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RNU6-840P-201ENST00000517275 65 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 MIR4431-201ENST00000579990 94 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 SNORD39.3-201ENST00000584451 71 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 BNIP3P24-201ENST00000593398 557 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL353778.1-201ENST00000603149 408 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC242628.1-201ENST00000606810 391 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RNU6-87P-201ENST00000607561 108 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL360219.1-201ENST00000610230 366 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MIR518A1-201ENST00000385068 85 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RAC1P6-201ENST00000423911 575 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms