Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.36□□□□□ -2.35
ABCA4P78363 MTCO2P25-201ENST00000447065 681 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU1-131P-201ENST00000458943 161 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RPS26P45-201ENST00000471748 340 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 SNORA3.4-201ENST00000515969 96 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU6-572P-201ENST00000516724 80 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 SNORD60.2-201ENST00000516883 86 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU6-1315P-201ENST00000517187 99 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.36□□□□□ -2.35
ABCA4P78363 AC093012.1-202ENST00000549403 582 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AL133153.1-201ENST00000557756 303 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AP003465.2-201ENST00000602571 373 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.36□□□□□ -2.35
ABCA4P78363 Y_RNA.132-201ENST00000363421 102 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU6-353P-201ENST00000364266 108 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNY3-201ENST00000365484 102 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 MIR1468-201ENST00000410600 86 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.36□□□□□ -2.35
ABCA4P78363 snoU13.14-201ENST00000459372 104 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU7-140P-201ENST00000459546 60 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC011005.2-201ENST00000487324 359 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU5A-4P-201ENST00000516588 111 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 RNU6-165P-201ENST00000517170 99 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC023632.1-201ENST00000518463 375 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
ABCA4P78363 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.36□□□□□ -2.35
ABCA4P78363 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC068620.3-201ENST00000602749 560 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC016911.1-201ENST00000613297 452 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC008759.3-201ENST00000613300 508 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.36□□□□□ -2.35
ABCA4P78363 AC120349.3-201ENST00000624377 529 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AL079343.1-201ENST00000572358 1771 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 AC068700.1-201ENST00000565862 3754 ntBASIC0.36□□□□□ -2.35
ABCA4P78363 SNORA4.3-201ENST00000365564 137 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AL669831.1-202ENST00000428504 417 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 MTND4P25-201ENST00000441039 533 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 EEF1E1P1-201ENST00000446998 430 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC024589.1-201ENST00000512207 263 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 RNU6-496P-201ENST00000516145 99 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 RNU6-343P-201ENST00000364709 104 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ABCA4P78363 Y_RNA.610-201ENST00000410681 103 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC009518.2-201ENST00000418056 731 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC027644.1-201ENST00000419595 298 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.35□□□□□ -2.35
ABCA4P78363 MTND5P14-201ENST00000441481 1267 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 RPL7P55-201ENST00000450522 746 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 snoU13.27-201ENST00000459278 104 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC079140.3-201ENST00000511111 550 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC074344.1-201ENST00000512823 224 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 RNU6-1092P-201ENST00000516955 87 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA4P78363 HMGN1P30-201ENST00000589286 268 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 MIR8063-201ENST00000621930 81 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC231657.1-201ENST00000624313 397 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 AC121333.1-201ENST00000567488 2709 ntBASIC0.35□□□□□ -2.35
ABCA4P78363 RNU6-1284P-201ENST00000363701 100 ntBASIC0.34□□□□□ -2.35
ABCA4P78363 UBE2V1P10-201ENST00000414685 269 ntBASIC0.34□□□□□ -2.35
ABCA4P78363 C8orf59P1-201ENST00000429930 303 ntBASIC0.34□□□□□ -2.35
ABCA4P78363 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.34□□□□□ -2.35
ABCA4P78363 MTND1P31-201ENST00000449206 961 ntBASIC0.34□□□□□ -2.35
ABCA4P78363 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.34□□□□□ -2.35
ABCA4P78363 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.35
ABCA4P78363 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.34□□□□□ -2.35
ABCA4P78363 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.34□□□□□ -2.35
ABCA4P78363 RNU4-73P-201ENST00000363164 141 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
ABCA4P78363 RNU6-700P-201ENST00000391043 107 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.34□□□□□ -2.36
ABCA4P78363 RAB28P5-201ENST00000427490 651 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 HSPE1P9-201ENST00000440046 311 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 AC114878.1-201ENST00000441166 358 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 SNORA31.3-201ENST00000516029 96 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 SNORA14.1-201ENST00000516113 141 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
ABCA4P78363 AC015688.6-201ENST00000577737 104 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.34□□□□□ -2.36
ABCA4P78363 AC060771.1-201ENST00000582031 164 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.34□□□□□ -2.36
ABCA4P78363 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 BNIP3P9-201ENST00000603714 553 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.34□□□□□ -2.36
ABCA4P78363 AC018926.1-201ENST00000616335 435 ntBASIC0.34□□□□□ -2.36
ABCA4P78363 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
ABCA4P78363 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
ABCA4P78363 RNU6-166P-201ENST00000384371 107 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 SEPT7P5-201ENST00000434048 306 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA4P78363 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA4P78363 ZNF886P-201ENST00000450781 723 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA4P78363 AC011406.1-201ENST00000512440 370 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AC087897.1-201ENST00000550134 156 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA4P78363 AC026741.1-201ENST00000605892 482 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
ABCA4P78363 AL158163.2-201ENST00000619110 700 ntBASIC0.33□□□□□ -2.36
ABCA4P78363 AC013470.4-201ENST00000619978 986 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms