Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-479P-201ENST00000516348 105 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RNA5SP165-201ENST00000517142 115 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AP005660.1-201ENST00000522972 293 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.86□□□□□ -1.79
ERVFC1P60507 AC016256.1-201ENST00000547971 354 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 MED28P6-201ENST00000558776 231 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AC104465.1-201ENST00000611365 139 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.86□□□□□ -1.79
ERVFC1P60507 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERVFC1P60507 RNU4-35P-201ENST00000362588 141 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 Y_RNA.418-201ENST00000384029 102 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RNU6-22P-201ENST00000384355 107 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RNA5SP31-201ENST00000411144 127 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 SETP5-201ENST00000437270 562 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AC006026.2-201ENST00000457376 180 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 snoU109.2-201ENST00000459316 135 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AF186996.7-201ENST00000492781 209 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RPL23AP49-201ENST00000492925 468 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RNU6-1219P-201ENST00000516143 112 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RNU2-27P-201ENST00000516185 142 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 SNORA31.20-201ENST00000517111 133 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 RNA5SP291-201ENST00000517222 105 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.85□□□□□ -1.79
ERVFC1P60507 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.85□□□□□ -1.79
ERVFC1P60507 MIR4308-201ENST00000580634 81 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AC008749.1-201ENST00000597650 306 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 YPEL5P2-201ENST00000605553 359 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.85□□□□□ -1.79
ERVFC1P60507 AC048347.1-201ENST00000624621 427 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 AC241585.2-209ENST00000638217 143 ntBASIC3.85□□□□□ -1.79
ERVFC1P60507 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ERVFC1P60507 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.85□□□□□ -1.79
ERVFC1P60507 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
ERVFC1P60507 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ERVFC1P60507 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERVFC1P60507 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERVFC1P60507 UBE3AP2-201ENST00000429033 2259 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.84□□□□□ -1.79
ERVFC1P60507 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ERVFC1P60507 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
ERVFC1P60507 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.84□□□□□ -1.79
ERVFC1P60507 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
ERVFC1P60507 RNA5SP361-201ENST00000362686 118 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-626P-201ENST00000363354 107 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-281P-201ENST00000384212 103 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-1145P-201ENST00000384246 107 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-959P-201ENST00000384671 107 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 HSPE1P26-201ENST00000405341 275 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 U3.37-201ENST00000408528 213 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.84□□□□□ -1.79
ERVFC1P60507 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.84□□□□□ -1.79
ERVFC1P60507 AC074133.1-201ENST00000515696 183 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 SNORA40.9-201ENST00000515895 93 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 SNORA43.2-201ENST00000516652 128 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNU6-567P-201ENST00000516746 107 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 AP004371.1-201ENST00000525240 214 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 TRAV28-201ENST00000557548 323 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 ZNF192P1-203ENST00000565888 810 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.84□□□□□ -1.79
ERVFC1P60507 AL356157.2-201ENST00000605122 111 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 MIR7851-201ENST00000610611 160 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 MIR8057-201ENST00000620957 69 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 MTND1P7-201ENST00000632801 297 ntBASIC3.84□□□□□ -1.79
ERVFC1P60507 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ERVFC1P60507 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
ERVFC1P60507 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
ERVFC1P60507 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ERVFC1P60507 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1P60507 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1P60507 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERVFC1P60507 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1P60507 RNU6-20P-201ENST00000384106 107 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 MIR10B-201ENST00000385011 110 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERVFC1P60507 AL031659.1-201ENST00000447075 539 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 UQCRBP2-201ENST00000447827 297 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 SSXP4-201ENST00000451349 245 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1P60507 HMGB1P22-201ENST00000505315 124 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 RNU6-62P-201ENST00000516526 102 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 RNU6-703P-201ENST00000516946 107 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 MIR5692C2-201ENST00000577959 77 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1P60507 AC005296.1-201ENST00000616145 209 ntBASIC3.83□□□□□ -1.8
ERVFC1P60507 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1P60507 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1P60507 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1P60507 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1P60507 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.82□□□□□ -1.8
ERVFC1P60507 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms