Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RMST_4.1-201ENST00000616886 107 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC009878.1-201ENST00000621819 340 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC131159.1-201ENST00000621854 213 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AL078595.3-201ENST00000623815 1166 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CLDN6P56747 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CLDN6P56747 RNU6-179P-201ENST00000363350 107 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CLDN6P56747 MTND4P20-201ENST00000424125 869 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 SNORA31.17-201ENST00000516953 127 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN6P56747 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN6P56747 MIR3169-201ENST00000578032 83 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN6P56747 AC073539.2-201ENST00000597113 165 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 AC027807.2-201ENST00000616099 408 ntBASIC1.35□□□□□ -2.19
CLDN6P56747 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN6P56747 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.34□□□□□ -2.19
CLDN6P56747 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.34□□□□□ -2.19
CLDN6P56747 AC245060.5-201ENST00000610778 3293 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 RNY1P12-201ENST00000364251 105 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 RNU6-1222P-201ENST00000384615 107 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 MIR520E-201ENST00000384867 87 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.34□□□□□ -2.19
CLDN6P56747 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC112492.4-201ENST00000456549 352 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.34□□□□□ -2.19
CLDN6P56747 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC005908.1-201ENST00000468701 347 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.34□□□□□ -2.19
CLDN6P56747 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 MIR449C-201ENST00000516047 92 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 Y_RNA.672-201ENST00000516289 104 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 RNU6-685P-201ENST00000517088 95 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.34□□□□□ -2.19
CLDN6P56747 AC022616.3-201ENST00000523940 148 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC115990.1-201ENST00000526957 301 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AP003461.1-201ENST00000528866 78 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC084364.2-201ENST00000546924 395 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 TRAV32-201ENST00000553993 340 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC112191.3-201ENST00000604371 277 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AC008993.2-201ENST00000631744 806 ntBASIC1.34□□□□□ -2.19
CLDN6P56747 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.34□□□□□ -2.19
CLDN6P56747 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
CLDN6P56747 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.34□□□□□ -2.2
CLDN6P56747 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 SNORA12-201ENST00000391162 147 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 RPL23AP32-201ENST00000395315 459 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 RNU6-387P-201ENST00000411331 105 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.33□□□□□ -2.2
CLDN6P56747 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN6P56747 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.33□□□□□ -2.2
CLDN6P56747 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.33□□□□□ -2.2
CLDN6P56747 AL360221.1-201ENST00000445989 335 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN6P56747 USP9YP12-201ENST00000450481 570 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AC130509.1-201ENST00000464158 433 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 COX6CP14-201ENST00000469580 174 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AC010409.1-201ENST00000487382 476 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.33□□□□□ -2.2
CLDN6P56747 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AP001893.2-201ENST00000526949 202 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.33□□□□□ -2.2
CLDN6P56747 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN6P56747 AL137100.2-201ENST00000555786 315 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.33□□□□□ -2.2
CLDN6P56747 AL121992.2-201ENST00000606262 256 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 AL451064.1-201ENST00000607718 471 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.33□□□□□ -2.2
CLDN6P56747 RNU6-500P-201ENST00000362349 107 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 Y_RNA.112-201ENST00000363250 102 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 SNORD114-6-201ENST00000364393 72 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 RNU5E-5P-201ENST00000365379 116 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 SNORA20.2-201ENST00000383922 131 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 RNU6-1245P-201ENST00000411130 106 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 ART2BP-201ENST00000453501 499 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 RNU6-1220P-201ENST00000517126 108 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
CLDN6P56747 AC022880.1-201ENST00000534017 973 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.32□□□□□ -2.2
CLDN6P56747 AL034555.1-201ENST00000604816 211 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AC018889.1-201ENST00000605372 397 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AP000240.1-201ENST00000609910 452 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AC104073.3-201ENST00000610942 955 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AC022709.1-201ENST00000615967 87 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 AC120349.3-201ENST00000624377 529 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 U4.7-201ENST00000638126 106 ntBASIC1.32□□□□□ -2.2
CLDN6P56747 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.32□□□□□ -2.2
CLDN6P56747 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN6P56747 LINC02555-201ENST00000563933 1951 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms