Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PMS1P54277 Y_RNA.20-201ENST00000362479 113 ntBASIC3.82□□□□□ -1.8
PMS1P54277 U8.10-201ENST00000384260 133 ntBASIC3.82□□□□□ -1.8
PMS1P54277 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PMS1P54277 SNORA57.1-201ENST00000391227 145 ntBASIC3.82□□□□□ -1.8
PMS1P54277 AC096638.1-201ENST00000444678 216 ntBASIC3.82□□□□□ -1.8
PMS1P54277 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
PMS1P54277 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
PMS1P54277 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
PMS1P54277 RNU6-1198P-201ENST00000516904 67 ntBASIC3.82□□□□□ -1.8
PMS1P54277 AC090897.2-201ENST00000581715 130 ntBASIC3.82□□□□□ -1.8
PMS1P54277 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.82□□□□□ -1.8
PMS1P54277 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PMS1P54277 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.82□□□□□ -1.8
PMS1P54277 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PMS1P54277 TNPO1P3-201ENST00000436471 2662 ntBASIC3.81□□□□□ -1.8
PMS1P54277 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.81□□□□□ -1.8
PMS1P54277 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
PMS1P54277 AC007496.3-201ENST00000624987 3443 ntBASIC3.81□□□□□ -1.8
PMS1P54277 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PMS1P54277 RNA5SP361-201ENST00000362686 118 ntBASIC3.81□□□□□ -1.8
PMS1P54277 SNORD113-8-201ENST00000363497 74 ntBASIC3.81□□□□□ -1.8
PMS1P54277 RNU6-487P-201ENST00000365430 104 ntBASIC3.81□□□□□ -1.8
PMS1P54277 SNORA36A-201ENST00000384221 132 ntBASIC3.81□□□□□ -1.8
PMS1P54277 MIR591-201ENST00000385290 95 ntBASIC3.81□□□□□ -1.8
PMS1P54277 Y_RNA.581-201ENST00000391017 97 ntBASIC3.81□□□□□ -1.8
PMS1P54277 SNORD12B-201ENST00000410433 91 ntBASIC3.81□□□□□ -1.8
PMS1P54277 WARS2P1-201ENST00000429678 537 ntBASIC3.81□□□□□ -1.8
PMS1P54277 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.81□□□□□ -1.8
PMS1P54277 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.81□□□□□ -1.8
PMS1P54277 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.81□□□□□ -1.8
PMS1P54277 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PMS1P54277 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
PMS1P54277 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.81□□□□□ -1.8
PMS1P54277 AC104619.4-201ENST00000510773 249 ntBASIC3.81□□□□□ -1.8
PMS1P54277 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.81□□□□□ -1.8
PMS1P54277 RNU6-1338P-201ENST00000516328 91 ntBASIC3.81□□□□□ -1.8
PMS1P54277 AC106785.1-201ENST00000565935 262 ntBASIC3.81□□□□□ -1.8
PMS1P54277 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PMS1P54277 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PMS1P54277 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PMS1P54277 Y_RNA.54-201ENST00000362766 105 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RNU6-137P-201ENST00000363680 108 ntBASIC3.8□□□□□ -1.8
PMS1P54277 Y_RNA.352-201ENST00000365439 102 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RNU6-622P-201ENST00000384272 103 ntBASIC3.8□□□□□ -1.8
PMS1P54277 MIR10B-201ENST00000385011 110 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RNA5SP213-201ENST00000391031 106 ntBASIC3.8□□□□□ -1.8
PMS1P54277 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS1P54277 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RPS15AP5-201ENST00000436276 388 ntBASIC3.8□□□□□ -1.8
PMS1P54277 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.8□□□□□ -1.8
PMS1P54277 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RPS23P5-201ENST00000495419 428 ntBASIC3.8□□□□□ -1.8
PMS1P54277 RNU6-58P-201ENST00000517143 103 ntBASIC3.8□□□□□ -1.8
PMS1P54277 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.8□□□□□ -1.8
PMS1P54277 AP000867.2-201ENST00000532468 320 ntBASIC3.8□□□□□ -1.8
PMS1P54277 UBL5P4-201ENST00000562584 236 ntBASIC3.8□□□□□ -1.8
PMS1P54277 MIR4474-201ENST00000579189 78 ntBASIC3.8□□□□□ -1.8
PMS1P54277 AC010900.2-201ENST00000604508 210 ntBASIC3.8□□□□□ -1.8
PMS1P54277 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PMS1P54277 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PMS1P54277 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PMS1P54277 Y_RNA.16-201ENST00000362421 102 ntBASIC3.79□□□□□ -1.8
PMS1P54277 SNORA5A-201ENST00000384111 134 ntBASIC3.79□□□□□ -1.8
PMS1P54277 Y_RNA.541-201ENST00000384640 113 ntBASIC3.79□□□□□ -1.8
PMS1P54277 MIR487A-201ENST00000385009 80 ntBASIC3.79□□□□□ -1.8
PMS1P54277 RNU6-159P-201ENST00000391080 106 ntBASIC3.79□□□□□ -1.8
PMS1P54277 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.79□□□□□ -1.8
PMS1P54277 snoU13.6-201ENST00000458785 104 ntBASIC3.79□□□□□ -1.8
PMS1P54277 AC107626.1-201ENST00000471084 183 ntBASIC3.79□□□□□ -1.8
PMS1P54277 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.79□□□□□ -1.8
PMS1P54277 SNORA70.19-201ENST00000516717 90 ntBASIC3.79□□□□□ -1.8
PMS1P54277 SCARNA24.2-201ENST00000516968 130 ntBASIC3.79□□□□□ -1.8
PMS1P54277 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.79□□□□□ -1.8
PMS1P54277 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.79□□□□□ -1.8
PMS1P54277 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
PMS1P54277 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PMS1P54277 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.79□□□□□ -1.8
PMS1P54277 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
PMS1P54277 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PMS1P54277 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PMS1P54277 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS1P54277 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PMS1P54277 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.78□□□□□ -1.8
PMS1P54277 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PMS1P54277 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
PMS1P54277 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PMS1P54277 RNU6-338P-201ENST00000383888 105 ntBASIC3.78□□□□□ -1.8
PMS1P54277 RNU6-198P-201ENST00000384258 104 ntBASIC3.78□□□□□ -1.8
PMS1P54277 SNORD63-201ENST00000384262 68 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AL603910.2-201ENST00000407268 136 ntBASIC3.78□□□□□ -1.8
PMS1P54277 RNU2-64P-201ENST00000411315 191 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AL358075.3-201ENST00000426289 226 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AL445305.1-201ENST00000432577 575 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.78□□□□□ -1.8
PMS1P54277 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
PMS1P54277 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PMS1P54277 AC010099.1-201ENST00000455434 375 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AL139109.1-201ENST00000455491 297 ntBASIC3.78□□□□□ -1.8
PMS1P54277 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms