Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 DEFB108C-201ENST00000400154 252 ntBASIC2.06□□□□□ -2.08
GPC3P51654 OR9R1P-201ENST00000412200 877 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AL590556.1-201ENST00000423231 483 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.06□□□□□ -2.08
GPC3P51654 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.06□□□□□ -2.08
GPC3P51654 AC108078.1-201ENST00000508073 725 ntBASIC2.06□□□□□ -2.08
GPC3P51654 MTCO3P7-201ENST00000510008 774 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AC091133.4-201ENST00000511142 308 ntBASIC2.06□□□□□ -2.08
GPC3P51654 MTND3P5-201ENST00000512798 333 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AC074344.1-201ENST00000512823 224 ntBASIC2.06□□□□□ -2.08
GPC3P51654 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.06□□□□□ -2.08
GPC3P51654 AC078795.2-201ENST00000602835 1252 ntBASIC2.06□□□□□ -2.08
GPC3P51654 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
GPC3P51654 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.06□□□□□ -2.08
GPC3P51654 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.06□□□□□ -2.08
GPC3P51654 ZNF680P1-201ENST00000436625 1469 ntBASIC2.06□□□□□ -2.08
GPC3P51654 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
GPC3P51654 ZNF72P-201ENST00000425869 1908 ntBASIC2.05□□□□□ -2.08
GPC3P51654 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
GPC3P51654 SNORD56.1-201ENST00000362913 68 ntBASIC2.05□□□□□ -2.08
GPC3P51654 Y_RNA.359-201ENST00000365498 102 ntBASIC2.05□□□□□ -2.08
GPC3P51654 RNU6-517P-201ENST00000384362 110 ntBASIC2.05□□□□□ -2.08
GPC3P51654 Y_RNA.480-201ENST00000384364 102 ntBASIC2.05□□□□□ -2.08
GPC3P51654 Y_RNA.481-201ENST00000384373 102 ntBASIC2.05□□□□□ -2.08
GPC3P51654 RNU6-434P-201ENST00000384376 107 ntBASIC2.05□□□□□ -2.08
GPC3P51654 RNU6-45P-201ENST00000384471 107 ntBASIC2.05□□□□□ -2.08
GPC3P51654 MIR9-3-201ENST00000385084 90 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 USP9YP18-201ENST00000425912 695 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.05□□□□□ -2.08
GPC3P51654 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.05□□□□□ -2.08
GPC3P51654 MTND2P29-201ENST00000438595 412 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AL360271.2-201ENST00000447710 161 ntBASIC2.05□□□□□ -2.08
GPC3P51654 RPS29P15-201ENST00000458329 171 ntBASIC2.05□□□□□ -2.08
GPC3P51654 RNU7-63P-201ENST00000459054 62 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
GPC3P51654 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.05□□□□□ -2.08
GPC3P51654 CYCSP27-201ENST00000527643 293 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC022616.8-201ENST00000533569 253 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.05□□□□□ -2.08
GPC3P51654 ANP32BP3-201ENST00000559213 706 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AP005136.1-201ENST00000579765 429 ntBASIC2.05□□□□□ -2.08
GPC3P51654 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.05□□□□□ -2.08
GPC3P51654 AC091805.2-201ENST00000603848 235 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC025449.1-201ENST00000603896 529 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC007684.1-201ENST00000609671 477 ntBASIC2.05□□□□□ -2.08
GPC3P51654 AC104073.3-201ENST00000610942 955 ntBASIC2.05□□□□□ -2.08
GPC3P51654 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
GPC3P51654 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
GPC3P51654 Y_RNA.1-201ENST00000352915 104 ntBASIC2.04□□□□□ -2.08
GPC3P51654 RNU6-384P-201ENST00000364900 104 ntBASIC2.04□□□□□ -2.08
GPC3P51654 RNU2-16P-201ENST00000410712 136 ntBASIC2.04□□□□□ -2.08
GPC3P51654 RNU6-607P-201ENST00000411283 108 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
GPC3P51654 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
GPC3P51654 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.04□□□□□ -2.08
GPC3P51654 SNRPFP3-201ENST00000457792 225 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AL162395.1-201ENST00000457882 422 ntBASIC2.04□□□□□ -2.08
GPC3P51654 Y_RNA.638-201ENST00000459374 113 ntBASIC2.04□□□□□ -2.08
GPC3P51654 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
GPC3P51654 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.04□□□□□ -2.08
GPC3P51654 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.04□□□□□ -2.08
GPC3P51654 BNIP3P6-201ENST00000549284 499 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.04□□□□□ -2.08
GPC3P51654 AC012507.3-201ENST00000603556 477 ntBASIC2.04□□□□□ -2.08
GPC3P51654 BNIP3P10-201ENST00000605360 577 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AC080013.6-201ENST00000606185 215 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AP001596.2-201ENST00000608410 312 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AC004908.3-201ENST00000610248 625 ntBASIC2.04□□□□□ -2.08
GPC3P51654 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
GPC3P51654 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
GPC3P51654 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.04□□□□□ -2.08
GPC3P51654 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
GPC3P51654 RNU5E-7P-201ENST00000365290 117 ntBASIC2.03□□□□□ -2.08
GPC3P51654 SNORD14D-201ENST00000384390 87 ntBASIC2.03□□□□□ -2.08
GPC3P51654 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
GPC3P51654 RNU2-9P-201ENST00000410194 145 ntBASIC2.03□□□□□ -2.08
GPC3P51654 POLHP1-201ENST00000411806 470 ntBASIC2.03□□□□□ -2.08
GPC3P51654 BTF3L4P1-201ENST00000413813 468 ntBASIC2.03□□□□□ -2.08
GPC3P51654 TIMM9P3-201ENST00000428659 274 ntBASIC2.03□□□□□ -2.08
GPC3P51654 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.03□□□□□ -2.08
GPC3P51654 AC104564.1-201ENST00000493028 407 ntBASIC2.03□□□□□ -2.08
GPC3P51654 MTND2P33-201ENST00000506452 1031 ntBASIC2.03□□□□□ -2.08
GPC3P51654 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
GPC3P51654 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.03□□□□□ -2.08
GPC3P51654 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
GPC3P51654 RNU6-1178P-201ENST00000516674 107 ntBASIC2.03□□□□□ -2.08
GPC3P51654 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.03□□□□□ -2.08
GPC3P51654 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.03□□□□□ -2.08
GPC3P51654 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.03□□□□□ -2.08
GPC3P51654 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.03□□□□□ -2.08
GPC3P51654 AC004223.2-201ENST00000590309 544 ntBASIC2.03□□□□□ -2.08
GPC3P51654 Z82243.1-201ENST00000609432 473 ntBASIC2.03□□□□□ -2.08
GPC3P51654 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms