Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RPS12P10-201ENST00000427031 377 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 AC006466.1-201ENST00000438721 289 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 MTCO1P44-201ENST00000441935 243 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF144AP50876 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF144AP50876 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF144AP50876 Y_RNA.651-201ENST00000459380 103 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 RNU6-928P-201ENST00000516876 104 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF144AP50876 ARF4P1-201ENST00000605447 541 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 MIR548AY-201ENST00000617669 107 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 U3.53-201ENST00000628922 216 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF144AP50876 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF144AP50876 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF144AP50876 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
RNF144AP50876 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF144AP50876 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF144AP50876 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF144AP50876 AC004944.1-201ENST00000517807 3059 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF144AP50876 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF144AP50876 AC021146.4-201ENST00000309229 279 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 RNU1-75P-201ENST00000347264 129 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 Y_RNA.35-201ENST00000362601 101 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF144AP50876 RNU6-1336P-201ENST00000383886 109 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 Y_RNA.495-201ENST00000384435 112 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 MIR3074-201ENST00000384885 81 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 SNRPGP8-201ENST00000454064 226 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 RNU2-44P-201ENST00000516795 194 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF144AP50876 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF144AP50876 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF144AP50876 AC024220.1-201ENST00000603675 484 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 AL391358.1-201ENST00000605342 190 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 AC099778.2-201ENST00000610904 211 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 SNX18P1Y-201ENST00000616231 511 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 AC006133.1-201ENST00000617106 264 ntBASIC4.23□□□□□ -1.73
RNF144AP50876 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF144AP50876 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF144AP50876 AC138915.1-201ENST00000565427 1685 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF144AP50876 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 Y_RNA.114-201ENST00000363265 113 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 U3.8-201ENST00000363675 217 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AC005300.1-201ENST00000428401 373 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF144AP50876 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF144AP50876 RPL23AP93-201ENST00000440847 484 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AL161651.1-201ENST00000440882 223 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 RPS4XP2-201ENST00000458402 793 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 SRIP1-201ENST00000489235 288 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AC008897.1-201ENST00000494006 347 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF144AP50876 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF144AP50876 RNU7-115P-201ENST00000516433 55 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 IGKV2D-19-201ENST00000523346 262 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF144AP50876 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF144AP50876 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AL121890.5-201ENST00000620848 304 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF144AP50876 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
RNF144AP50876 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF144AP50876 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF144AP50876 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF144AP50876 SDAD1P1-202ENST00000524156 2051 ntBASIC4.22□□□□□ -1.73
RNF144AP50876 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF144AP50876 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF144AP50876 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF144AP50876 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF144AP50876 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
RNF144AP50876 AL513302.2-201ENST00000562313 1842 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RNF144AP50876 RNU6-529P-201ENST00000363383 104 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 Y_RNA.369-201ENST00000365568 117 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RNU6-32P-201ENST00000383948 107 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 SNORA20B-201ENST00000384220 132 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RNU6-13P-201ENST00000384248 107 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RNU6-12P-201ENST00000384604 107 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 SNORA1.3-201ENST00000384676 136 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RNU6-41P-201ENST00000384741 107 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 AL133475.1-201ENST00000404414 305 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RN7SKP267-201ENST00000410381 285 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RN7SKP167-201ENST00000411047 285 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF144AP50876 MLLT10P1-201ENST00000418346 262 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF144AP50876 AC107626.1-201ENST00000471084 183 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms