Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNNI2P48788 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.17□□□□□ -1.74
TNNI2P48788 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 RNU6-858P-201ENST00000362436 107 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 Y_RNA.478-201ENST00000384358 107 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 RNU6-748P-201ENST00000384648 107 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 MIR128-1-201ENST00000384921 82 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 RN7SKP111-201ENST00000410349 271 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.17□□□□□ -1.74
TNNI2P48788 SDAD1P3-201ENST00000427380 333 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 SNORA59A-201ENST00000459326 152 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.17□□□□□ -1.74
TNNI2P48788 ACA59.2-201ENST00000517061 156 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 AL355877.2-201ENST00000603670 358 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.17□□□□□ -1.74
TNNI2P48788 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
TNNI2P48788 CEP170P1-201ENST00000502249 4587 ntBASIC4.17□□□□□ -1.74
TNNI2P48788 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNNI2P48788 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNNI2P48788 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNNI2P48788 snoU2_19.2-201ENST00000363024 80 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 PTGES3P4-201ENST00000426243 356 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.16□□□□□ -1.74
TNNI2P48788 RNU6-581P-201ENST00000516214 105 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 IGKV2-26-201ENST00000518305 343 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.16□□□□□ -1.74
TNNI2P48788 AP002770.2-201ENST00000543613 532 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.16□□□□□ -1.74
TNNI2P48788 AC136932.1-201ENST00000574771 208 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 AC010900.2-201ENST00000604508 210 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 MIR7112-201ENST00000616126 65 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 AC241585.2-209ENST00000638217 143 ntBASIC4.16□□□□□ -1.74
TNNI2P48788 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNNI2P48788 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.16□□□□□ -1.74
TNNI2P48788 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TNNI2P48788 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.15□□□□□ -1.74
TNNI2P48788 MFSD8-233ENST00000641482 4860 ntBASIC4.15□□□□□ -1.74
TNNI2P48788 Y_RNA.20-201ENST00000362479 113 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 Y_RNA.416-201ENST00000384014 113 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 Y_RNA.515-201ENST00000384535 112 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 Y_RNA.539-201ENST00000384635 107 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 SNORD115-46-201ENST00000390982 71 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 RNA5SP252-201ENST00000391131 119 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AC023141.4-201ENST00000412031 328 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AL590135.1-201ENST00000422215 156 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 Z82188.1-201ENST00000436709 154 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AC006028.1-201ENST00000438379 402 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TNNI2P48788 AC243964.1-201ENST00000441814 261 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AC007969.2-201ENST00000441891 191 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AL513124.1-201ENST00000450410 614 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 RPL7P47-201ENST00000497299 556 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 HMGB1P35-201ENST00000503360 598 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 FCF1P8-201ENST00000510322 597 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 RNU6-138P-201ENST00000515952 107 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.15□□□□□ -1.75
TNNI2P48788 AC022080.3-201ENST00000544433 482 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 AC025281.1-201ENST00000567026 265 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 RPL23AP78-201ENST00000599928 470 ntBASIC4.15□□□□□ -1.75
TNNI2P48788 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.15□□□□□ -1.75
TNNI2P48788 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TNNI2P48788 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.15□□□□□ -1.75
TNNI2P48788 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TNNI2P48788 GABRG2-229ENST00000641017 3628 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.14□□□□□ -1.75
TNNI2P48788 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNNI2P48788 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TNNI2P48788 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNNI2P48788 RNU1-105P-201ENST00000363470 161 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 U3.13-201ENST00000364804 214 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 RNY3P4-201ENST00000384428 101 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 RNU6-19P-201ENST00000384718 107 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 RNU6-750P-201ENST00000390946 107 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNNI2P48788 BX679664.1-201ENST00000434429 253 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.14□□□□□ -1.75
TNNI2P48788 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TNNI2P48788 AC107626.1-201ENST00000471084 183 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 RPS26P21-201ENST00000475397 348 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 RNU5B-3P-201ENST00000516601 115 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 SNORA31.23-201ENST00000517219 133 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.14□□□□□ -1.75
TNNI2P48788 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.14□□□□□ -1.75
TNNI2P48788 MIR5680-201ENST00000577577 84 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 SCARNA15.3-201ENST00000626315 122 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 SCARNA4.1-201ENST00000628597 123 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.14□□□□□ -1.75
TNNI2P48788 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TNNI2P48788 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
TNNI2P48788 Z83843.1-201ENST00000604070 3685 ntBASIC4.14□□□□□ -1.75
TNNI2P48788 AC007256.1-201ENST00000392253 2765 ntBASIC4.13□□□□□ -1.75
TNNI2P48788 SNORD56.1-201ENST00000362913 68 ntBASIC4.13□□□□□ -1.75
TNNI2P48788 Y_RNA.237-201ENST00000364439 102 ntBASIC4.13□□□□□ -1.75
TNNI2P48788 RNU6-142P-201ENST00000384019 107 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms