Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN9P43378 AP001324.2-201ENST00000461163 319 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AC008571.1-201ENST00000467232 300 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 MTND4P17-201ENST00000470444 350 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 RPS27AP9-201ENST00000477681 438 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AC008549.1-201ENST00000512900 643 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AC026782.1-201ENST00000512952 449 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 ACA59.1-201ENST00000515966 143 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 RNA5SP282-201ENST00000516355 108 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN9P43378 AC079598.5-201ENST00000547460 117 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.76□□□□□ -1.97
PTPN9P43378 GTF3AP2-201ENST00000557014 266 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.76□□□□□ -1.97
PTPN9P43378 AC007792.1-201ENST00000623023 402 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN9P43378 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN9P43378 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN9P43378 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN9P43378 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 RNU6-1141P-201ENST00000364520 107 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 MTCYBP4-201ENST00000401524 249 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 RNU2-23P-201ENST00000410545 195 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 RNU4-14P-201ENST00000410858 122 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 MTND4P28-201ENST00000426217 387 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 snoU13.14-201ENST00000459372 104 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN9P43378 RNU6-559P-201ENST00000516151 98 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 RNU6-826P-201ENST00000516827 104 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 Y_RNA.708-201ENST00000516950 96 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 AC016256.1-201ENST00000547971 354 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN9P43378 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 AP000560.1-201ENST00000624150 1937 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
PTPN9P43378 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN9P43378 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN9P43378 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN9P43378 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PTPN9P43378 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN9P43378 RNU6-859P-201ENST00000362728 107 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 RNU4-79P-201ENST00000362764 141 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 SNORD114-19-201ENST00000363072 75 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 SNORD32A-201ENST00000364805 84 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 RNU6-790P-201ENST00000384479 105 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 RNU6-692P-201ENST00000384496 107 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 BTF3L4P2-201ENST00000392798 346 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AL591034.2-201ENST00000402839 359 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AL078595.1-201ENST00000404458 226 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 RN7SKP61-201ENST00000410642 295 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 EIF4EP2-201ENST00000422816 654 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC236972.2-201ENST00000434979 310 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 RPL22P13-201ENST00000493291 347 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN9P43378 SCARNA17.1-201ENST00000516211 143 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 SNORA31.6-201ENST00000516241 130 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 SCARNA17.2-201ENST00000516334 143 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN9P43378 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN9P43378 AC105137.2-201ENST00000569073 466 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 MIR5690-201ENST00000583739 73 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 MIR4795-201ENST00000584182 89 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 SCARNA17.4-201ENST00000614296 143 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AL159153.1-201ENST00000619688 317 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 AC097372.5-201ENST00000623665 376 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PTPN9P43378 AC080100.1-201ENST00000624239 5356 ntBASIC2.74□□□□□ -1.97
PTPN9P43378 Y_RNA.11-201ENST00000362375 109 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 RNU6-1188P-201ENST00000363795 107 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 RNU6-784P-201ENST00000384330 106 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 RNU6-174P-201ENST00000410406 106 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AC078809.1-201ENST00000427601 140 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN9P43378 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN9P43378 SNORD109B-201ENST00000458961 67 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 SNORD109A-201ENST00000459128 67 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN9P43378 AC096576.1-201ENST00000489014 359 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AIG1P1-201ENST00000503376 148 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.73□□□□□ -1.97
PTPN9P43378 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN9P43378 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN9P43378 AC115990.1-201ENST00000526957 301 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.73□□□□□ -1.97
PTPN9P43378 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN9P43378 AC093027.1-201ENST00000546698 429 ntBASIC2.73□□□□□ -1.97
PTPN9P43378 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms