Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.26□□□□□ -2.45
HTTP42858 MIR3681-201ENST00000580089 72 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC004832.4-201ENST00000608952 331 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC092268.1-201ENST00000342691 405 ntBASIC-0.26□□□□□ -2.45
HTTP42858 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.26□□□□□ -2.45
HTTP42858 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.26□□□□□ -2.45
HTTP42858 SNORD65-201ENST00000391079 73 ntBASIC-0.26□□□□□ -2.45
HTTP42858 MIR1185-1-201ENST00000408598 86 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC007435.1-201ENST00000421086 415 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AL049734.2-201ENST00000441066 616 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.26□□□□□ -2.45
HTTP42858 RNVU1-2-201ENST00000516326 135 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.26□□□□□ -2.45
HTTP42858 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.26□□□□□ -2.45
HTTP42858 AC015688.6-201ENST00000577737 104 ntBASIC-0.26□□□□□ -2.45
HTTP42858 RNU6-91P-201ENST00000607774 107 ntBASIC-0.26□□□□□ -2.45
HTTP42858 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.26□□□□□ -2.45
HTTP42858 AC009318.4-201ENST00000620496 486 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC080188.3-201ENST00000624842 748 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC134026.1-201ENST00000623249 2239 ntBASIC-0.26□□□□□ -2.45
HTTP42858 RNU6-374P-201ENST00000364146 108 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.27□□□□□ -2.45
HTTP42858 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-546P-201ENST00000383991 107 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR587-201ENST00000384845 96 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU2-33P-201ENST00000410344 192 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL139396.1-201ENST00000421137 167 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL035398.1-201ENST00000430869 322 ntBASIC-0.27□□□□□ -2.45
HTTP42858 SPINT5P-201ENST00000448174 155 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.27□□□□□ -2.45
HTTP42858 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.27□□□□□ -2.45
HTTP42858 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.27□□□□□ -2.45
HTTP42858 AC126365.2-201ENST00000580630 379 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AC091152.3-201ENST00000604227 325 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL121992.2-201ENST00000606262 256 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL137246.1-201ENST00000607072 977 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR6755-201ENST00000619993 66 ntBASIC-0.27□□□□□ -2.45
HTTP42858 SNORD82-201ENST00000365530 70 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-898P-201ENST00000365627 104 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RPL22P22-201ENST00000395439 379 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU2-59P-201ENST00000410482 191 ntBASIC-0.27□□□□□ -2.45
HTTP42858 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.27□□□□□ -2.45
HTTP42858 MTND4LP10-201ENST00000435146 291 ntBASIC-0.27□□□□□ -2.45
HTTP42858 ZNF886P-201ENST00000450781 723 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.27□□□□□ -2.45
HTTP42858 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.27□□□□□ -2.45
HTTP42858 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.27□□□□□ -2.45
HTTP42858 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.27□□□□□ -2.45
HTTP42858 AC025423.5-201ENST00000550230 219 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AC092325.1-201ENST00000566449 554 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR4504-201ENST00000577413 92 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR5697-201ENST00000578045 78 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AL031281.1-201ENST00000604049 488 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR3976-201ENST00000606807 139 ntBASIC-0.27□□□□□ -2.45
HTTP42858 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR548AZ-201ENST00000616567 95 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AC073968.1-201ENST00000618594 637 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-730P-201ENST00000383954 104 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-815P-201ENST00000384080 113 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MTND1P28-201ENST00000435623 950 ntBASIC-0.27□□□□□ -2.45
HTTP42858 RPS15AP9-201ENST00000439856 381 ntBASIC-0.27□□□□□ -2.45
HTTP42858 U8.21-201ENST00000459536 136 ntBASIC-0.27□□□□□ -2.45
HTTP42858 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.27□□□□□ -2.45
HTTP42858 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.27□□□□□ -2.45
HTTP42858 AL132657.2-201ENST00000564417 358 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR4788-201ENST00000639104 80 ntBASIC-0.27□□□□□ -2.45
HTTP42858 AC119674.1-220ENST00000641502 1048 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MTND5P32-201ENST00000560711 1802 ntBASIC-0.27□□□□□ -2.45
HTTP42858 MIR103A2-201ENST00000362154 78 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SNORA42.1-201ENST00000363515 137 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
HTTP42858 DSTNP4-201ENST00000399472 474 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RNU2-43P-201ENST00000410306 190 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SNORD71-201ENST00000411292 86 ntBASIC-0.28□□□□□ -2.45
HTTP42858 C8orf59P1-201ENST00000429930 303 ntBASIC-0.28□□□□□ -2.45
HTTP42858 YWHAZP8-201ENST00000436935 731 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RPL26P6-201ENST00000440913 438 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RPL7P55-201ENST00000450522 746 ntBASIC-0.28□□□□□ -2.45
HTTP42858 LINC01399-202ENST00000458450 244 ntBASIC-0.28□□□□□ -2.45
HTTP42858 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.28□□□□□ -2.45
HTTP42858 RPF2P2-201ENST00000504693 896 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AC113410.1-201ENST00000505029 247 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RNU6-27P-201ENST00000516146 107 ntBASIC-0.28□□□□□ -2.45
HTTP42858 RNU2-12P-201ENST00000517216 168 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AF129408.1-201ENST00000608767 431 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AL078595.3-201ENST00000623815 1166 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SNORA48.1-201ENST00000390879 135 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SEPT7P5-201ENST00000434048 306 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SEPT7P4-201ENST00000437076 306 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AC005094.1-201ENST00000440420 368 ntBASIC-0.28□□□□□ -2.45
HTTP42858 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.28□□□□□ -2.45
HTTP42858 NACAP3-201ENST00000552100 481 ntBASIC-0.28□□□□□ -2.45
HTTP42858 TRAV32-201ENST00000553993 340 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AL590229.1-201ENST00000603497 542 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AL161729.4-201ENST00000604650 476 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AC121334.2-201ENST00000605387 271 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AL583856.2-201ENST00000606298 543 ntBASIC-0.28□□□□□ -2.45
HTTP42858 AC005021.1-201ENST00000608730 355 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms