Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.18□□□□□ -1.9
COL15A1P39059 APOOP3-201ENST00000536787 586 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AC103996.1-201ENST00000555468 102 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.18□□□□□ -1.9
COL15A1P39059 MIR5092-201ENST00000583139 88 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AC124303.1-201ENST00000605703 360 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AL133255.1-201ENST00000606374 441 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AL133215.3-201ENST00000609801 448 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AC011890.2-201ENST00000613393 294 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AC004852.3-201ENST00000614131 326 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL15A1P39059 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.18□□□□□ -1.9
COL15A1P39059 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL15A1P39059 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
COL15A1P39059 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
COL15A1P39059 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
COL15A1P39059 RNU6-858P-201ENST00000362436 107 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 Y_RNA.40-201ENST00000362645 93 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 RNY4P36-201ENST00000391116 96 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 AL030996.1-201ENST00000411430 235 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 AC012308.1-201ENST00000451232 178 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 RPL30P15-201ENST00000457129 321 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 RPL23AP49-201ENST00000492925 468 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.17□□□□□ -1.9
COL15A1P39059 Y_RNA.708-201ENST00000516950 96 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 RNU6-548P-201ENST00000517083 115 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.17□□□□□ -1.9
COL15A1P39059 AC044792.1-201ENST00000593294 196 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.17□□□□□ -1.9
COL15A1P39059 AC103810.6-201ENST00000606708 136 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 AC133104.2-201ENST00000615272 193 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 MIR6134-201ENST00000617606 109 ntBASIC3.17□□□□□ -1.9
COL15A1P39059 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
COL15A1P39059 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL15A1P39059 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL15A1P39059 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL15A1P39059 RNU6-78P-201ENST00000362897 107 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 RNU6-527P-201ENST00000363425 104 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 Y_RNA.315-201ENST00000365117 102 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 MIR518D-201ENST00000385014 87 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 RNU6-325P-201ENST00000411132 105 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
COL15A1P39059 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.16□□□□□ -1.9
COL15A1P39059 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.16□□□□□ -1.9
COL15A1P39059 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 HMGN2P10-201ENST00000448085 265 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 U8.21-201ENST00000459536 136 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 RPL9P9-202ENST00000466501 579 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.16□□□□□ -1.9
COL15A1P39059 RNU6-581P-201ENST00000516214 105 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
COL15A1P39059 TRAV32-201ENST00000553993 340 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AL121821.2-201ENST00000556081 394 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.16□□□□□ -1.9
COL15A1P39059 AC015712.3-201ENST00000559380 164 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC021739.1-201ENST00000559631 174 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 MIR4648-201ENST00000580107 72 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.16□□□□□ -1.9
COL15A1P39059 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AL356055.1-201ENST00000602528 446 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC009314.1-201ENST00000603871 304 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.16□□□□□ -1.9
COL15A1P39059 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.16□□□□□ -1.9
COL15A1P39059 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
COL15A1P39059 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL15A1P39059 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
COL15A1P39059 Y_RNA.4-201ENST00000362333 112 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 RNU6-428P-201ENST00000362942 107 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 RNA5SP456-201ENST00000364002 114 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 SNORD116-29-201ENST00000384516 83 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 SNORA75.4-201ENST00000391278 119 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 RNU6-1050P-201ENST00000410388 107 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.15□□□□□ -1.9
COL15A1P39059 AL117339.3-201ENST00000418733 162 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 Z82205.1-201ENST00000428456 297 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AL356320.1-201ENST00000429616 163 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.15□□□□□ -1.9
COL15A1P39059 AL714022.1-201ENST00000439897 151 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.15□□□□□ -1.9
COL15A1P39059 GSTA11P-201ENST00000452866 669 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.15□□□□□ -1.9
COL15A1P39059 RNU7-23P-201ENST00000459465 62 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.9
COL15A1P39059 RNU6-1170P-201ENST00000515974 106 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 SNORA43.2-201ENST00000516652 128 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 Y_RNA.701-201ENST00000516812 110 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.15□□□□□ -1.9
COL15A1P39059 DEFB122-202ENST00000569013 197 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AC018462.2-201ENST00000605375 395 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AL627309.6-201ENST00000606857 840 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AC009229.3-201ENST00000608056 282 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 AL669831.3-213ENST00000636676 183 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 U4.7-201ENST00000638126 106 ntBASIC3.15□□□□□ -1.9
COL15A1P39059 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL15A1P39059 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.15□□□□□ -1.91
COL15A1P39059 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms