Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.69□□□□□ -2.3
CASP1P29466 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.69□□□□□ -2.3
CASP1P29466 7SK.8-201ENST00000612110 250 ntBASIC0.69□□□□□ -2.3
CASP1P29466 7SK.11-201ENST00000615477 250 ntBASIC0.69□□□□□ -2.3
CASP1P29466 7SK.13-201ENST00000622040 250 ntBASIC0.69□□□□□ -2.3
CASP1P29466 AC010615.1-201ENST00000594254 1764 ntBASIC0.69□□□□□ -2.3
CASP1P29466 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.69□□□□□ -2.3
CASP1P29466 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.68□□□□□ -2.3
CASP1P29466 SNORA63.3-201ENST00000362682 132 ntBASIC0.68□□□□□ -2.3
CASP1P29466 SNORA63D-201ENST00000364359 132 ntBASIC0.68□□□□□ -2.3
CASP1P29466 Y_RNA.472-201ENST00000384322 102 ntBASIC0.68□□□□□ -2.3
CASP1P29466 RNU6-331P-201ENST00000384724 107 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.68□□□□□ -2.3
CASP1P29466 SNX2P2-201ENST00000424553 323 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AL008629.1-201ENST00000438615 184 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AC007969.2-201ENST00000441891 191 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AC005741.1-201ENST00000511094 432 ntBASIC0.68□□□□□ -2.3
CASP1P29466 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.68□□□□□ -2.3
CASP1P29466 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AC008088.1-201ENST00000580993 280 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AL353778.1-201ENST00000603149 408 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AL022345.2-201ENST00000606307 135 ntBASIC0.68□□□□□ -2.3
CASP1P29466 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.68□□□□□ -2.3
CASP1P29466 FRG1KP-201ENST00000623592 341 ntBASIC0.68□□□□□ -2.3
CASP1P29466 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
CASP1P29466 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CASP1P29466 RNU4-15P-201ENST00000362613 141 ntBASIC0.67□□□□□ -2.3
CASP1P29466 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
CASP1P29466 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
CASP1P29466 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CASP1P29466 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
CASP1P29466 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
CASP1P29466 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
CASP1P29466 SNRPEP8-201ENST00000442866 260 ntBASIC0.67□□□□□ -2.3
CASP1P29466 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.67□□□□□ -2.3
CASP1P29466 AC006026.2-201ENST00000457376 180 ntBASIC0.67□□□□□ -2.3
CASP1P29466 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.67□□□□□ -2.3
CASP1P29466 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
CASP1P29466 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
CASP1P29466 RNA5SP481-201ENST00000516814 122 ntBASIC0.67□□□□□ -2.3
CASP1P29466 SNORD60.2-201ENST00000516883 86 ntBASIC0.67□□□□□ -2.3
CASP1P29466 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.67□□□□□ -2.3
CASP1P29466 DEFB131E-202ENST00000602581 683 ntBASIC0.67□□□□□ -2.3
CASP1P29466 AC018889.1-201ENST00000605372 397 ntBASIC0.67□□□□□ -2.3
CASP1P29466 AC091965.4-201ENST00000607691 587 ntBASIC0.67□□□□□ -2.3
CASP1P29466 AL451064.1-201ENST00000607718 471 ntBASIC0.67□□□□□ -2.3
CASP1P29466 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.67□□□□□ -2.3
CASP1P29466 AC126544.2-201ENST00000625174 749 ntBASIC0.67□□□□□ -2.3
CASP1P29466 OR4G3P-201ENST00000633500 913 ntBASIC0.67□□□□□ -2.3
CASP1P29466 RNU6-960P-201ENST00000364056 120 ntBASIC0.66□□□□□ -2.3
CASP1P29466 RNU6-17P-201ENST00000384245 107 ntBASIC0.66□□□□□ -2.3
CASP1P29466 RNU6-18P-201ENST00000384527 107 ntBASIC0.66□□□□□ -2.3
CASP1P29466 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CASP1P29466 RPL23AP30-201ENST00000432419 501 ntBASIC0.66□□□□□ -2.3
CASP1P29466 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.66□□□□□ -2.3
CASP1P29466 MTCO3P28-201ENST00000513351 515 ntBASIC0.66□□□□□ -2.3
CASP1P29466 HSPE1P4-201ENST00000550617 308 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AC104073.3-201ENST00000610942 955 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AC006386.1-201ENST00000619436 415 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AL121895.2-201ENST00000619558 447 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AC131159.1-201ENST00000621854 213 ntBASIC0.66□□□□□ -2.3
CASP1P29466 RMST_7.1-201ENST00000621935 268 ntBASIC0.66□□□□□ -2.3
CASP1P29466 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.66□□□□□ -2.3
CASP1P29466 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.66□□□□□ -2.3
CASP1P29466 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CASP1P29466 RNU6-862P-201ENST00000362804 105 ntBASIC0.65□□□□□ -2.31
CASP1P29466 RNU6-413P-201ENST00000384115 107 ntBASIC0.65□□□□□ -2.31
CASP1P29466 SNORA12.2-201ENST00000391040 156 ntBASIC0.65□□□□□ -2.31
CASP1P29466 RNU2-62P-201ENST00000410868 191 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AL031779.1-201ENST00000415663 330 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.65□□□□□ -2.31
CASP1P29466 TAF9P1-201ENST00000445421 515 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.65□□□□□ -2.31
CASP1P29466 TAF9P2-201ENST00000454958 515 ntBASIC0.65□□□□□ -2.31
CASP1P29466 RPL31P3-201ENST00000458430 332 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC145146.1-201ENST00000496370 254 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.65□□□□□ -2.31
CASP1P29466 SCARNA16.2-201ENST00000516520 172 ntBASIC0.65□□□□□ -2.31
CASP1P29466 RNA5SP503-201ENST00000517047 117 ntBASIC0.65□□□□□ -2.31
CASP1P29466 CYCSP23-201ENST00000519781 313 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC013828.2-201ENST00000532487 235 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.65□□□□□ -2.31
CASP1P29466 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
CASP1P29466 MIR3664-201ENST00000579074 99 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AL391646.1-201ENST00000603860 190 ntBASIC0.65□□□□□ -2.31
CASP1P29466 MIR3976-201ENST00000606807 139 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC072039.2-201ENST00000608883 439 ntBASIC0.65□□□□□ -2.31
CASP1P29466 MIR6504-201ENST00000613520 61 ntBASIC0.65□□□□□ -2.31
CASP1P29466 AC068647.2-201ENST00000637380 353 ntBASIC0.65□□□□□ -2.31
CASP1P29466 RNU6-78P-201ENST00000362897 107 ntBASIC0.64□□□□□ -2.31
CASP1P29466 SNORA4.1-201ENST00000364263 144 ntBASIC0.64□□□□□ -2.31
CASP1P29466 RNU6-1019P-201ENST00000364424 107 ntBASIC0.64□□□□□ -2.31
CASP1P29466 RNU1-36P-201ENST00000365130 165 ntBASIC0.64□□□□□ -2.31
CASP1P29466 MIR578-201ENST00000384828 96 ntBASIC0.64□□□□□ -2.31
CASP1P29466 RNU6-298P-201ENST00000390888 96 ntBASIC0.64□□□□□ -2.31
CASP1P29466 RNU6-1176P-201ENST00000390955 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms