Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 ZNF680P1-201ENST00000436625 1469 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 RNU6-1120P-201ENST00000362988 108 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AL357139.1-201ENST00000407792 426 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 MTATP6P18-201ENST00000417994 673 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AL590135.1-201ENST00000422215 156 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC019205.3-201ENST00000424573 156 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 MTND4P32-201ENST00000437189 1237 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC016700.2-201ENST00000446011 156 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 BET1P1-201ENST00000482276 359 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC015911.1-201ENST00000495111 156 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC022880.1-201ENST00000534017 973 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPA1P20036 VN1R107P-201ENST00000601784 209 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AC025754.2-201ENST00000606491 432 ntBASIC1.98□□□□□ -2.09
HLA-DPA1P20036 AP000560.1-201ENST00000624150 1937 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 RNU6-266P-201ENST00000364225 107 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 SNORD32B-201ENST00000364460 84 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 SNORA51.11-201ENST00000384442 131 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 POLHP1-201ENST00000411806 470 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 MTCO2P34-201ENST00000421994 607 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 SRIP2-201ENST00000428470 166 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 RNU6-333P-201ENST00000459117 107 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC132942.1-201ENST00000486753 483 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC079804.2-201ENST00000490376 200 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AK3P2-201ENST00000507976 429 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 RN7SKP219-201ENST00000516825 296 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 MTCO2P4-201ENST00000517968 247 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 COPS8P3-201ENST00000526024 482 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 MTCO3P23-201ENST00000561363 289 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AGGF1P4-201ENST00000568249 801 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC110760.3-201ENST00000598794 467 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC121247.2-201ENST00000604776 136 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AC130454.1-201ENST00000622948 401 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HLA-DPA1P20036 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HLA-DPA1P20036 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNU6-827P-201ENST00000365553 106 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNU6-160P-201ENST00000384591 107 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RPS29P13-201ENST00000402041 169 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AL117339.3-201ENST00000418733 162 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 USP9YP29-201ENST00000445112 563 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AL356010.1-201ENST00000456364 102 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 snoU13.15-201ENST00000459407 104 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 RNA5SP490-201ENST00000517141 136 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AC069113.1-201ENST00000517763 267 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AL137161.1-201ENST00000532231 390 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 HSPE1P4-201ENST00000550617 308 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 AC103996.1-201ENST00000555468 102 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 MIR3941-201ENST00000582572 103 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
HLA-DPA1P20036 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DPA1P20036 Y_RNA.399-201ENST00000383955 105 ntBASIC1.95□□□□□ -2.1
HLA-DPA1P20036 RNU6-26P-201ENST00000383985 107 ntBASIC1.95□□□□□ -2.1
HLA-DPA1P20036 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPA1P20036 AC078809.1-201ENST00000427601 140 ntBASIC1.95□□□□□ -2.1
HLA-DPA1P20036 HMGN2P18-201ENST00000450680 270 ntBASIC1.95□□□□□ -2.1
HLA-DPA1P20036 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms