Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPRAP18433 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
PTPRAP18433 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPRAP18433 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.25□□□□□ -1.73
PTPRAP18433 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPRAP18433 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRAP18433 ZNF204P-201ENST00000416749 2397 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRAP18433 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRAP18433 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRAP18433 SNORD115-8-201ENST00000363856 82 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 Y_RNA.262-201ENST00000364641 102 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 SNORD50B-201ENST00000364995 70 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 SNORD115-38-201ENST00000365037 82 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 RNU1-73P-201ENST00000383971 164 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 Y_RNA.441-201ENST00000384123 112 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 RNU6-1117P-201ENST00000384525 104 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 RPL26P27-201ENST00000414397 437 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 BMS1P22-201ENST00000414726 313 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 HMGN2P30-201ENST00000423237 256 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AL358075.3-201ENST00000426289 226 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 RPL21P66-201ENST00000426566 466 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AC005326.1-201ENST00000429197 123 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AC010095.1-201ENST00000443543 144 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRAP18433 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPRAP18433 RNU6-966P-201ENST00000516479 104 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRAP18433 MIR7851-201ENST00000610611 160 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 AC048347.1-201ENST00000624621 427 ntBASIC4.24□□□□□ -1.73
PTPRAP18433 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRAP18433 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPRAP18433 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PTPRAP18433 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPRAP18433 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPRAP18433 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRAP18433 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPRAP18433 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRAP18433 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRAP18433 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPRAP18433 RNU6-873P-201ENST00000363833 107 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 RNU4-56P-201ENST00000364700 142 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 RNU6-1130P-201ENST00000365434 107 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 SNORD116-18-201ENST00000383961 92 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 AC005300.1-201ENST00000428401 373 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 AL353748.1-201ENST00000440753 474 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 RN7SL807P-201ENST00000470923 297 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 RNU6-1198P-201ENST00000516904 67 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPRAP18433 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPRAP18433 AC022441.3-201ENST00000605737 136 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRAP18433 MIR6134-201ENST00000617606 109 ntBASIC4.23□□□□□ -1.73
PTPRAP18433 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PTPRAP18433 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPRAP18433 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPRAP18433 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRAP18433 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTPRAP18433 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPRAP18433 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPRAP18433 SRP72P2-201ENST00000344851 1979 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPRAP18433 RNU4-35P-201ENST00000362588 141 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 FTH1P15-201ENST00000406984 280 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPRAP18433 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPRAP18433 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC125238.1-201ENST00000448842 249 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 RPL37P4-201ENST00000448908 268 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC005042.3-201ENST00000453230 174 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 RPS29P2-201ENST00000479278 136 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC025518.1-201ENST00000479856 347 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 RPL30P5-201ENST00000494923 336 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC016632.1-201ENST00000503994 196 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 CR383656.8-201ENST00000549046 145 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPRAP18433 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPRAP18433 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AC068831.7-201ENST00000616954 363 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPRAP18433 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPRAP18433 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
PTPRAP18433 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PTPRAP18433 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRAP18433 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPRAP18433 RNU4-80P-201ENST00000363200 141 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 RNU6-884P-201ENST00000363889 107 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 RNU6-1141P-201ENST00000364520 107 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 SNORA48.2-201ENST00000390926 124 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 AL357139.1-201ENST00000407792 426 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 Y_RNA.595-201ENST00000410403 105 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 RNU2-51P-201ENST00000410708 197 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 NDUFB4P6-201ENST00000436819 366 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 IFNA11P-201ENST00000446352 526 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 AP000705.1-201ENST00000454567 350 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 AC010469.1-201ENST00000463864 576 ntBASIC4.21□□□□□ -1.74
PTPRAP18433 TRBV12-2-201ENST00000489763 344 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms