Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-EP13747 AC097473.1-201ENST00000508142 408 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-EP13747 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNA5SP437-201ENST00000517249 129 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-EP13747 MIR1273C-201ENST00000578669 77 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC099785.1-201ENST00000605697 437 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC022893.3-201ENST00000607665 437 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-EP13747 RMST_4.1-201ENST00000616886 107 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC027335.2-201ENST00000624030 375 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
HLA-EP13747 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-EP13747 RNU5A-8P-201ENST00000364102 114 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 RNU6-395P-201ENST00000365662 106 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 RNU6-72P-201ENST00000384285 79 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 MIR1284-201ENST00000408337 120 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 RNA5SP390-201ENST00000410191 113 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.66□□□□□ -2.3
HLA-EP13747 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-EP13747 AC132479.1-201ENST00000449160 144 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 SNORD116-28-201ENST00000516123 91 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 RNU6-1092P-201ENST00000516955 87 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.66□□□□□ -2.3
HLA-EP13747 AL512310.8-201ENST00000550183 120 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.66□□□□□ -2.3
HLA-EP13747 BNIP3P31-201ENST00000604515 566 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AP002802.2-201ENST00000605877 235 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AL031775.1-201ENST00000607014 887 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 AL021879.1-201ENST00000611756 288 ntBASIC0.66□□□□□ -2.3
HLA-EP13747 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HLA-EP13747 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 Y_RNA.332-201ENST00000365271 113 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 MIR520A-201ENST00000384862 85 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 Y_RNA.578-201ENST00000390903 88 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.65□□□□□ -2.31
HLA-EP13747 AC013262.1-201ENST00000426710 252 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 SUMO2P5-201ENST00000506790 245 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 RNU6-496P-201ENST00000516145 99 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-EP13747 AL512605.2-201ENST00000592972 256 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 AL391001.1-201ENST00000602747 715 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 MZT1P2-201ENST00000604387 248 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 AC090578.1-201ENST00000604955 591 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 BX284668.6-201ENST00000606899 438 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 AC007792.1-201ENST00000623023 402 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
HLA-EP13747 SNORA25-201ENST00000384384 134 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 MIR1305-201ENST00000408300 86 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 Y_RNA.623-201ENST00000411128 95 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AL590556.1-201ENST00000423231 483 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-EP13747 MTCO1P27-201ENST00000448269 226 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 HSPE1P13-201ENST00000451143 297 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AL139824.2-201ENST00000458731 1095 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AL163195.1-201ENST00000496941 348 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-EP13747 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-EP13747 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.64□□□□□ -2.31
HLA-EP13747 AL355816.2-201ENST00000610049 647 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AL365204.3-201ENST00000612448 685 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AC130324.3-201ENST00000614165 542 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 AL159153.1-201ENST00000619688 317 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.64□□□□□ -2.31
HLA-EP13747 AL163152.1-201ENST00000642001 374 ntBASIC0.64□□□□□ -2.31
HLA-EP13747 SNORD3E-201ENST00000362899 217 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 SMIM11P1-201ENST00000369586 178 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HLA-EP13747 MIR320C1-201ENST00000408566 88 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 RNU2-7P-201ENST00000410794 178 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-EP13747 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 MTCYBP5-201ENST00000423752 1135 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-EP13747 AC134050.1-201ENST00000495088 933 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 SCARNA16.2-201ENST00000516520 172 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 RNU5A-4P-201ENST00000516588 111 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 RN7SKP88-201ENST00000516847 250 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 RNU6-677P-201ENST00000516914 101 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC091163.3-201ENST00000518269 1144 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.63□□□□□ -2.31
HLA-EP13747 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.63□□□□□ -2.31
HLA-EP13747 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AL590229.1-201ENST00000603497 542 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 7SK.8-201ENST00000612110 250 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 7SK.11-201ENST00000615477 250 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 7SK.13-201ENST00000622040 250 ntBASIC0.63□□□□□ -2.31
HLA-EP13747 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-EP13747 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
HLA-EP13747 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
HLA-EP13747 SNORA40.2-201ENST00000390847 128 ntBASIC0.62□□□□□ -2.31
HLA-EP13747 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms