Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP001282.2-201ENST00000616149 309 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL6A2P12110 AC022149.2-201ENST00000621061 203 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL6A2P12110 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.56□□□□□ -1.84
COL6A2P12110 MFSD8-236ENST00000641509 4050 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 MFSD8-233ENST00000641482 4860 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL6A2P12110 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL6A2P12110 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.55□□□□□ -1.84
COL6A2P12110 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COL6A2P12110 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COL6A2P12110 snoU2_19.2-201ENST00000363024 80 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 SNORD81.1-201ENST00000363064 77 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 SNORA20.1-201ENST00000364790 130 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 Y_RNA.504-201ENST00000384481 104 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 MIR30B-201ENST00000384850 88 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL6A2P12110 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC023141.4-201ENST00000412031 328 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC245291.1-201ENST00000419501 328 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 GPM6BP3-201ENST00000442797 145 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC096638.1-201ENST00000444678 216 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 RN7SL594P-201ENST00000470590 287 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AP000870.1-201ENST00000472927 406 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.55□□□□□ -1.84
COL6A2P12110 AC027288.2-201ENST00000553028 243 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC021231.3-201ENST00000558497 370 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC012433.1-201ENST00000588916 398 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AC011373.1-201ENST00000607270 237 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.55□□□□□ -1.84
COL6A2P12110 MIR376A1-201ENST00000616574 68 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 AP003355.3-201ENST00000623465 114 ntBASIC3.55□□□□□ -1.84
COL6A2P12110 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
COL6A2P12110 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
COL6A2P12110 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL6A2P12110 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL6A2P12110 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 Y_RNA.60-201ENST00000362831 98 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 SNORD63-201ENST00000384262 68 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 RNU6-318P-201ENST00000384283 103 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AL079342.1-201ENST00000401460 267 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.54□□□□□ -1.84
COL6A2P12110 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 AC244670.1-201ENST00000436879 112 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AC004383.1-201ENST00000438135 289 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 RPS15AP7-201ENST00000439294 405 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AL161651.1-201ENST00000440882 223 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 AC012308.1-201ENST00000451232 178 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 MTND4LP30-201ENST00000454092 297 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 RNU7-23P-201ENST00000459465 62 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 RNU5B-3P-201ENST00000516601 115 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.54□□□□□ -1.84
COL6A2P12110 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.54□□□□□ -1.84
COL6A2P12110 MIR4659A-201ENST00000580269 81 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 AC006130.2-201ENST00000586202 326 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
COL6A2P12110 AC110774.1-201ENST00000623567 2018 ntBASIC3.54□□□□□ -1.84
COL6A2P12110 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.54□□□□□ -1.84
COL6A2P12110 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL6A2P12110 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
COL6A2P12110 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COL6A2P12110 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL6A2P12110 Y_RNA.20-201ENST00000362479 113 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 Y_RNA.143-201ENST00000363520 106 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 MIR215-201ENST00000384858 110 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL6A2P12110 RPS26P42-201ENST00000413485 326 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.53□□□□□ -1.84
COL6A2P12110 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.53□□□□□ -1.84
COL6A2P12110 AL358075.3-201ENST00000426289 226 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 RPL39P29-201ENST00000447779 157 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC010099.1-201ENST00000455434 375 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.53□□□□□ -1.84
COL6A2P12110 AC110768.1-201ENST00000509222 400 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 SNORA67.7-201ENST00000516664 135 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC023632.4-201ENST00000517783 191 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 RN7SL703P-201ENST00000578485 302 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms